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scnpilot_solids2_trim150_scaffold_100_curated

Search features with annotation key words

Displaying items 91-106 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_100_curated_91
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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103552..104127
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWM6_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD08205.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_100_curated_92
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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104258..105235
DNA (978bp) protein (326aa)
Putative membrane protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXD7_HALH1
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEE49345.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_100_curated_93
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

105240..106634
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I4H7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EJF53615.1}; Flags: Precursor;; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
gldK; gliding motility protein GldK
scnpilot_solids2_trim150_scaffold_100_curated_94
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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106755..107549
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000370A383
gldL; gliding motility-like protein
Protein involved in gliding motility GldL {ECO:0000313|EMBL:ABG57464.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_solids2_trim150_scaffold_100_curated_95
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

107614..109227
DNA (1614bp) protein (538aa)
Gliding motility-associated protein GldM n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWZ9_SOLCM
gliding motility-associated protein GldM
Gliding motility-associated protein GldM {ECO:0000313|EMBL:AFD08328.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_100_curated_96
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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109248..110072
DNA (825bp) protein (275aa)
Gliding motility protein GldN n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L9V7_SAPGL
Gliding motility associated protein GldN {ECO:0000313|EMBL:KGE89559.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
gldN; gliding motility protein GldN
scnpilot_solids2_trim150_scaffold_100_curated_97
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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110206..111780
DNA (1575bp) protein (525aa)
ATP synthase F1 subunit alpha; K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
ATP synthase subunit alpha n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4N4_PEDSD
scnpilot_solids2_trim150_scaffold_100_curated_98
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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111889..112725
DNA (837bp) protein (279aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EYM1_EMTOG
alpha/beta hydrolase fold containing protein
Tax=BJP_IG2157_Anaerolineales_55_23
scnpilot_solids2_trim150_scaffold_100_curated_99
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112762..113172)
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:AKE52977.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojedonensis.;"
hypothetical protein id=12554572 bin=CNBR_ACIDO species=Arenimonas oryziterrae genus=Arenimonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
scnpilot_solids2_trim150_scaffold_100_curated_100
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(113177..114259)
DNA (1083bp) protein (361aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=uncultured organism RepID=T1W718_9ZZZZ
ABC transporter permease {ECO:0000313|EMBL:ETZ24209.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
scnpilot_solids2_trim150_scaffold_100_curated_101
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(114296..114853)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000373C229
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48886.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_100_curated_102
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(114859..115653)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RIP7_CELLC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY30391.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC; 14961 / NCIMB 1423 / VKM B-1433 / Cy l20).;"
scnpilot_solids2_trim150_scaffold_100_curated_103
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


115768..118197
DNA (2430bp) protein (810aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
Phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GDQ2_LACS5
scnpilot_solids2_trim150_scaffold_100_curated_104
unknown

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comp(118204..118434)
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_100_curated_105
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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118590..119237
DNA (648bp) protein (216aa)
Phosphate transport regulator n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GS76_9SPHI
phosphate transport system regulatory protein PhoU
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_100_curated_106
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

119247..120236
DNA (990bp) protein (330aa)
Phosphate/sulfate permease n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRZ1_SOLCM
phosphate/sulfate permease
Phosphate/sulfate permease {ECO:0000313|EMBL:AFD07779.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Displaying items 91-106 of 106 in total

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