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scnpilot_solids2_trim150_scaffold_100_curated_48

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(59679..61277)

Top 3 Functional Annotations

Value Algorithm Source
Dehydrosqualene desaturase {ECO:0000313|EMBL:EKB49999.1}; EC=1.3.8.2 {ECO:0000313|EMBL:EKB49999.1};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 529.0
  • Bit_score: 606
  • Evalue 2.90e-170
Phytoene dehydrogenase and related protein; K09516 all-trans-retinol 13,14-reductase [EC:1.3.99.23] similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 523.0
  • Bit_score: 587
  • Evalue 3.10e-165
Dehydrosqualene desaturase n=1 Tax=Cecembia lonarensis LW9 RepID=K1M0Y5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 529.0
  • Bit_score: 606
  • Evalue 2.10e-170

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Taxonomy

Cecembia lonarensis → Cecembia → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1599
ATGGTGAAATCAAAGCACGTAAAATCGTTTCTCACACATAAACCTTCAGACAATTTTGATGTAATTGTGGTTGGCTCCGGAATGGGCGGAACGGCAACTGCTGCCTTGCTTGCAAAAGAAGGAAAGCGCGTGCTTGTTTTGGAACAGCACTACACAGCCGGAGGGTTCACACATGCTTATATGCGCAGAGGTTATTTGTGGGATGTGGGCATTCACTATGTTGGCGAAATGCAGAACGAGAAAAATTTGATGACTAAGCTTTTTAAATACCTGAGCAACGACCAACTGAAATGGGCAGACATGGGTGAAGTTTACGACAAAATGATTTTCGGTAAAGAAGTTTACGATTATGCAAAAGGTAAAGAAGAGTTTAAGGCTAAACTAAAAACCTATTTTCCTGAGCCAAATGACCAACTGGCAATAGACCATTATGTGCAAGCAATTTACGATGCACAGCGAGCGCAAATGGGCTTTTTTACCGAGAAGTTATTGCCTCGATTTTTGCAGCCGTTTTTGAGTACTTGGCTTCGTAAAAAAGCATTGAAATGGAACAAAACCACTTTGGAAGTTTTGCAATCTATTACACAAAATAGAAAGTTGATTGCCGTGCTCACAGGGCAGTTTGGCGACTATGGTTTACCTCCTGCCGAAAGCAGTTTTATGATGCACGCCATTTTAGCAAAACATTACATGCGCGGTGGAAATTATCCTGTTGGCGGTGCAGGAAAAATATTTGAAACTATTGCACCTGCTATTTGTGAAGCCGGAGGCGAAATTTTTGTAAACGCTCCAGTAAAAGAAATTATTTTAAAAAACAACAAAGCTATTGGTGTGAAAATGGAAAGCGGAGAAGAATATTTTGCGCCAACTATTGTGAGCAATACCGGAATAAATACCACTTTCAAAAAATTGCTGCCGAAAGAAATTGTGCAGCAAAATCATTTAGATAAAAAACTAACGCAGCTTACTCCTTCTGTTGGGCATGTGTGTCTTTACATCGGGTTAAGGCATTCAAAATCTTCGTTGAATTTGGGCAAAGCAAACTATTGGATATTTCCTGATAACTACGACCACGATCTAAATATTAAAAACTATCTCGCCAATCCGGATAGCGAAATTCCTGTTGTTTATATATCATTTCCATCGGCAAAAGATCCTGCTTGGGAGGCTGAATTTCCTGAACGCTCCACTATTGAAATTGTTACGCTTGCGCCTTACGAATGGTACGCAGCATGGAGCAACCAACCTTGGAAAAAAAGAGGACAAGATTACGAAGCGCAAAAAGAAAAACTAAGCCAGCGACTACTCGAAAAACTATTTGAGCAAGAACCGCAACTGCGCGATAAAATTGATTATTACGAACTCTCTACACCACTAAGCACCAAGCATTTCACTAATTACGAAGTAGGTGAATTATATGGCATTAACCACGATGTGAAGCGCTTTAGCCAAACTTTTTTGCGCCCAAAATCACCAATTAAAAACTTGTATTTAACCGGGCAAGATATTGTGAGCTGTGGTGTGGGCGGAGCGCTTTCTGCCGGATTGCTCACCGCTTCTGCCATTACAGGAAAAAACTTAATGAAGCGGTTGAAGTAA
PROTEIN sequence
Length: 533
MVKSKHVKSFLTHKPSDNFDVIVVGSGMGGTATAALLAKEGKRVLVLEQHYTAGGFTHAYMRRGYLWDVGIHYVGEMQNEKNLMTKLFKYLSNDQLKWADMGEVYDKMIFGKEVYDYAKGKEEFKAKLKTYFPEPNDQLAIDHYVQAIYDAQRAQMGFFTEKLLPRFLQPFLSTWLRKKALKWNKTTLEVLQSITQNRKLIAVLTGQFGDYGLPPAESSFMMHAILAKHYMRGGNYPVGGAGKIFETIAPAICEAGGEIFVNAPVKEIILKNNKAIGVKMESGEEYFAPTIVSNTGINTTFKKLLPKEIVQQNHLDKKLTQLTPSVGHVCLYIGLRHSKSSLNLGKANYWIFPDNYDHDLNIKNYLANPDSEIPVVYISFPSAKDPAWEAEFPERSTIEIVTLAPYEWYAAWSNQPWKKRGQDYEAQKEKLSQRLLEKLFEQEPQLRDKIDYYELSTPLSTKHFTNYEVGELYGINHDVKRFSQTFLRPKSPIKNLYLTGQDIVSCGVGGALSAGLLTASAITGKNLMKRLK*