ggKbase home page

scnpilot_solids2_trim150_scaffold_107_curated_169

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(197587..199998)

Top 3 Functional Annotations

Value Algorithm Source
Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:ADQ15918.1}; EC=3.1.21.3 {ECO:0000313|EMBL:ADQ15918.1};; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 801.0
  • Bit_score: 1383
  • Evalue 0.0
type i site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 801.0
  • Bit_score: 1383
  • Evalue 0.0
Type I site-specific deoxyribonuclease id=1879850 bin=GWE2_Bacteroidetes_42_24 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 803.0
  • Bit_score: 1430
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leadbetterella byssophila → Leadbetterella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2412
ATGATAGATAAAAAGACACTTTCTGAACGTGATATATGCACCAAGTTTATTACTCCTGCGGTTGAAAAATCGGGTTGGAATACGCTGACACAACTATTGGAGGAAGTATCGTTCACGGACGGAAAAATATATGTTAGAGGTAAACTGACAGCGAGAGGAAATCAAAAACGTGCTGACTATATTCTATATTACAAACCGAATATTCCAATTGCAATTATTGAAGCTAAAGACAACAAACATTCAGTAAGAGCAGGAATTCAACAGGCTTTGGATTATGCTCAAATTCTTGACATTCCTTGTGTTTTCAGTAGCAACGGTGACGGCTTTTTATTTCACGACCGTACCGCAACAGACGGAAATATAGAAACTGAAATTGGCTTAGACGACTTCCCTACTCCGCAACAACTTTGGGAGAAATACAAAAAGTATAAAGGCATCACGACTGAATCGGCTGAAAAAATTGCTTCGCAAGACTATTATTTTGACGGTACAAACCGCAAACCAAGATACTACCAACAAATTGCCGTAAACAGAACTGTTGAAGCTATTGCCAACGGACAAGACAGAATACTGCTTGTAATGGCAACTGGAACTGGTAAGACATACACTGCTTTTCAAATTATTCACAGACTTTGGAAAAGCGGAGCAAAAAAACGGATTCTGTTTTTAGCCGACCGAAACGCTTTAATTGACCAAACTCGCAGAGGCGATTTCAAACATTTTAAAGATAAAATGACGGTGGTAAAACACCGACAAATTGATAAGAGCTATGAAATTTATTTGGCTTTGTATCAAGGTTTATCAGGTTCTGACGAAGATACGAATGTGTACAAACAGTTTTCACCTGACTTCTTTGATTTGATTGTAATTGACGAGTGCCACAGAGGAAGTGCCAAAGAAGACAGCAGTTGGAGAGAAATTTTATCCTATTTTAAAAATGCTACGCATATTGGTTTAACAGCCACTCCAAAAGAAACTAAAGAAACAAGCAACACCGAATATTTTGGTGACCCAGTTTATACCTATTCATTGAAACAAGGTATTGACGATGGTTTTCTTGCTCCTTATCGTGTGGTGAGAATTGGTTTGAACGTAGATGCCGAAGGCTGGCGACCAGAACAAGGCAAAACCGACAAAGACGGCAATCCTGTTGAAGATAGAATATACAACCGCAAAGACTTTGATCGCAATTTGGTAATTGAGGAACGGACAGAATTGGTTGCCAAAAAATTGACAGAGTTTTTAAAAGGTTACGACCGCTTCGCCAAAACGATTGTTTTTTGTGTGGACATTGACCACGCTGAACGAATGAGAACGGCATTAGCCAAACAAAATGCTGATTTAGTTGCCGAGAATTACAAATACGTAATGCAAATAACTGGCGATAATGACGAAGGCAAACGTGAATTAGACAACTTCATTAATCCCGAAGAAAAATATCCAGTCATTGCCACTACTTCTGAATTGATGACTACTGGTGTAGATGCACAAACTTGTAAAGTAATTGTATTGGATGCCAATATCAATTCAATGACCAAGTTCAAACAAATTATTGGACGTGGAACCCGAATCAATGAGGAATACGGCAAAATGTATTTCACCATTCTTGATTTTAGAAACGCAACTGATTTGTTTGCTGATAAAGATTTTGACGGTGACCCAATTCGTGTAAAACCAGTTTCGCAAGACGAAGATTTGTCATTGGTTGTAATAGAGGAAGAAGAAAACACCGTAAGCGTTTTAGATGAAATCACAGGAGAAGAAATCAAATTTGAAAAGGCAACTATCCGCTATCCTGATGGTTCAAAATTGGGTGACAATTGGGTAGCCAAAGAGCCAAACCAACAAAGAGAAAAGGTTTATGTAAACGGTGTAGACGTTTCTGTTTTGGTGAGCCGTGAAATGTATTTTGACCAGCACGGAAAACCAATCACCACCAGTTTAAAAGACCACACCAAAGAAATTATCCAAGAGCAATTTGCTTCCTTAGATGATTTTCTAAACAAGTGGAAAGGTTCTGACCGCAAAGAAGCCATCATTGCAGAATTGATTGAACAGGGTGTAATGGTGGAAGCATTGTATGAAGCAGTTGACAAGCAAGTGGATTTGTTTGATTTAATTTGCCACGTTGCTTATGACCAATCACCAATGACACGAAAAGAACGGGCAAACAACGTGAAGAAACGCAACTACTTTACCAAGTATGGCGAGCAAGCCCGAAAAGTATTGGAAGCCTTGTTAGACAAATATGCTGATGAAGGCATTACCAATATTGAAAGCATTGAAGTATTGAGAGTAAATCCCTTTGATGAATTTGGTTCACCACTTGAAATCATCAACGAGTTTGGCAGTAAAGAAAAATATTTGCAAGCCGTAAAAGAATTAGAAATTGAATTATACAAAACAGCATAA
PROTEIN sequence
Length: 804
MIDKKTLSERDICTKFITPAVEKSGWNTLTQLLEEVSFTDGKIYVRGKLTARGNQKRADYILYYKPNIPIAIIEAKDNKHSVRAGIQQALDYAQILDIPCVFSSNGDGFLFHDRTATDGNIETEIGLDDFPTPQQLWEKYKKYKGITTESAEKIASQDYYFDGTNRKPRYYQQIAVNRTVEAIANGQDRILLVMATGTGKTYTAFQIIHRLWKSGAKKRILFLADRNALIDQTRRGDFKHFKDKMTVVKHRQIDKSYEIYLALYQGLSGSDEDTNVYKQFSPDFFDLIVIDECHRGSAKEDSSWREILSYFKNATHIGLTATPKETKETSNTEYFGDPVYTYSLKQGIDDGFLAPYRVVRIGLNVDAEGWRPEQGKTDKDGNPVEDRIYNRKDFDRNLVIEERTELVAKKLTEFLKGYDRFAKTIVFCVDIDHAERMRTALAKQNADLVAENYKYVMQITGDNDEGKRELDNFINPEEKYPVIATTSELMTTGVDAQTCKVIVLDANINSMTKFKQIIGRGTRINEEYGKMYFTILDFRNATDLFADKDFDGDPIRVKPVSQDEDLSLVVIEEEENTVSVLDEITGEEIKFEKATIRYPDGSKLGDNWVAKEPNQQREKVYVNGVDVSVLVSREMYFDQHGKPITTSLKDHTKEIIQEQFASLDDFLNKWKGSDRKEAIIAELIEQGVMVEALYEAVDKQVDLFDLICHVAYDQSPMTRKERANNVKKRNYFTKYGEQARKVLEALLDKYADEGITNIESIEVLRVNPFDEFGSPLEIINEFGSKEKYLQAVKELEIELYKTA*