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scnpilot_solids2_trim150_scaffold_5472_curated_2

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(356..1147)

Top 3 Functional Annotations

Value Algorithm Source
Cation efflux protein n=5 Tax=Riemerella anatipestifer RepID=E4TDV3_RIEAD similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 3.30e-129
Co/Zn/Cd efflux system component similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 263.0
  • Bit_score: 468
  • Evalue 1.00e-129
Co/Zn/Cd efflux system component {ECO:0000313|EMBL:AFD55033.1}; TaxID=693978 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer (strain ATCC 11845 / DSM 15868 / JCM 9532 /; NCTC 11014).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 253.0
  • Bit_score: 450
  • Evalue 2.20e-123

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Taxonomy

Riemerella anatipestifer → Riemerella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 792
ATGCAGAAAACGACATTTAAAATATCAAAGATGGACTGCCCATCCGAAGAGCAAATGATACGGATGAAACTTGCCGACCTTACAAATATCAACTCGTTGGACTTTGACATTCCTAACAGACAACTGACCGTTTTTCACTCAGACAATCACGACCAAATTTTTCAGCGACTTGACAACCTAAACTTTGACACTTCACTCATAGACAGCGTTTCGGCAGACAATTACACAGCGACAACAGACAATTCAAGCCGAGAAAGAAAATTGCTTTGGCAAGTTTTAGCCATCAACTTTTTCTTTTTTGCACTTGAACTTACGACAGGTTTTATATCCAACTCAATGGGACTTGTCGCAGACAGTTTGGATATGCTTGCCGACAGCATTGTTTACGGACTTGCACTTTTTGCAGTTGGCGGGACAATGGCACGAAAAAAGAACATTGCAAAATCAGCAGGTTATTTTCAATTGACACTTGCTGTCTTCGGTTTAATTGAAGTAATCAGGCGATTTGCAGGGACAGAAGCAGTTCCTGCATTTCAGACAATGATAATTATTTCAATTCTTGCACTTATTGCAAACGGACTTTGTTTATATCTACTGCAAAAAGGCAAAAGCAAGGAAGCACACATGCAAGCAAGTATGATTTTTACATCTAATGACGTAATTGTAAATCTTGGAGTAATTGTAGCAGGCGGACTTGTCTTTTTGACAAACTCAAAACTACCTGACTTGATTATTGGAACGCTTGTATTTGCAATTGTTGCAAGGGGAGCAATCCGCATTTTGAAACTGTAA
PROTEIN sequence
Length: 264
MQKTTFKISKMDCPSEEQMIRMKLADLTNINSLDFDIPNRQLTVFHSDNHDQIFQRLDNLNFDTSLIDSVSADNYTATTDNSSRERKLLWQVLAINFFFFALELTTGFISNSMGLVADSLDMLADSIVYGLALFAVGGTMARKKNIAKSAGYFQLTLAVFGLIEVIRRFAGTEAVPAFQTMIIISILALIANGLCLYLLQKGKSKEAHMQASMIFTSNDVIVNLGVIVAGGLVFLTNSKLPDLIIGTLVFAIVARGAIRILKL*