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scnpilot_solids2_trim150_scaffold_2836_curated_12

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(12355..13074)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 237.0
  • Bit_score: 201
  • Evalue 3.70e-49
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 237.0
  • Bit_score: 201
  • Evalue 1.20e-48
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 235.0
  • Bit_score: 202
  • Evalue 7.40e-49

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 720
ATGAGCCAGATACCAATAATTTTTGAAGACGAATATTTAGTAATTGCCAATAAACCAAGCGGCATTGCAAGTATTCCCGAGCGCAACGGAAGCAGAGAAAACTCTTTTGTGGGAATGCTCGAAAGCCAAATAGGGCAACTGTTTGTGGTACACAGAATTGATAAGCAAACCAGTGGAATTTTATGTTTTGCAAAAACCGAAGATGTGCACAAAGCATTGAGTTTAATATTTGAAAACCGAGAAGTAGAAAAAGAATATTTCGCGGTGGTGAAAGGAAATGTGCTTGAGCCACACGGCATTATCAATGAGCCTTTGGCAGAAAATCCTGCGCGTCCTGGAACCATGAAAGTGTATGCAAAAGGCAAAGAAGCAATTTCGGAATATTGGGTAAATGAAAATTTTAAACACGCTGCATGGCTTCGCGTAAAAATTTATACCGGAAGAATGCACCAAATTCGTGTGCATTTAAAATCTATCGGACATCCACTTTTGGTGGACGAAATTTATGCCGGAACTAAAAATTTTCATATTTCATCGGTGATGAAAAACTTTAAGCAAAACCTTGAGGAAGAAACTCGCCCAACCATTGCGCGAACTACACTTCACGCGGCAAAGCTTGGTTTTATTCACCCAATTACAAAGCAAAGTATTTCGGTAGAAGCACCATTGCCAAAAGATTTTGAAGTGCTGCTAAAATTGCTGCGCAAAAACAATCGTTAA
PROTEIN sequence
Length: 240
MSQIPIIFEDEYLVIANKPSGIASIPERNGSRENSFVGMLESQIGQLFVVHRIDKQTSGILCFAKTEDVHKALSLIFENREVEKEYFAVVKGNVLEPHGIINEPLAENPARPGTMKVYAKGKEAISEYWVNENFKHAAWLRVKIYTGRMHQIRVHLKSIGHPLLVDEIYAGTKNFHISSVMKNFKQNLEEETRPTIARTTLHAAKLGFIHPITKQSISVEAPLPKDFEVLLKLLRKNNR*