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scnpilot_solids2_trim150_scaffold_132_curated_4

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 2793..3359

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-recycling factor n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXD1_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 188.0
  • Bit_score: 225
  • Evalue 6.00e-56
ribosome recycling factor similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 188.0
  • Bit_score: 225
  • Evalue 1.90e-56
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 188.0
  • Bit_score: 225
  • Evalue 8.40e-56

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Taxonomy

Solitalea canadensis → Solitalea → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 567
ATGACAGATGCAGATGTAAAAAAAGTACTTGACGAAACACGCACTTTAATGGAAAAAGCTGTTGATCACTTTGATTATGAGTTGTCGAAAATAAGAGCAGGTAGAGCTACTCCTGCCATGCTGGAAGGTATAGAAGTGGAAGCTTACGGCAGCCGCTCACCGCTAAACCAAATGGCAAATATTTCTACCCCCGATGCTAAAACCATTACCGTTCAAGCATGGGACACTTCTCTTTTGCAAGCTATTGAGCGCGGAATAATGATGGCAAACATTGGACTTACACCGCAAAACGATGGAAAAATAATTCGCTTAAATGTGCCGCCACTTTCTGAAGAACGCAGAAAAGACTTGGTGAAGCAAGCTAAAGGAGAAGCTGAAAATGCACGCGTTTCTGTAAGAAATATTCGCAGAGAAGCCAACGAAAAAATAAAGAAACTTGCTAAAGATGGTTTGCCTGAAGATGCTGCAAAAAAAGCTGAAACCGACATTCAAAATATCACCAACGATTACACCAACAAGGTTGAAAAACACGTAGAGGTGAAAGAAAAAGAAATTATGACAGTTTAG
PROTEIN sequence
Length: 189
MTDADVKKVLDETRTLMEKAVDHFDYELSKIRAGRATPAMLEGIEVEAYGSRSPLNQMANISTPDAKTITVQAWDTSLLQAIERGIMMANIGLTPQNDGKIIRLNVPPLSEERRKDLVKQAKGEAENARVSVRNIRREANEKIKKLAKDGLPEDAAKKAETDIQNITNDYTNKVEKHVEVKEKEIMTV*