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scnpilot_solids2_trim150_scaffold_947_curated_8

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 8590..9981

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J834_CYCMS similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 462.0
  • Bit_score: 600
  • Evalue 1.30e-168
RND transporter {ECO:0000313|EMBL:KJS06595.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 463.0
  • Bit_score: 639
  • Evalue 4.60e-180
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 462.0
  • Bit_score: 600
  • Evalue 4.00e-169

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Taxonomy

Flavobacteriales bacterium BRH_c54 → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1392
ATGCTGGTTTCGGTTGGCGGCTGCAAACTTTTTAAAGAGCCGATAAAAACTGAAAACAAAAGCGTGCCAGAGGGTTTTAATACTTCTTCGCAAGACACCACAAACTCTGCCAAAGTGAAGTGGCGAAATTATTTTAATGATGTAAATTTAATTGCGCTCATTGATACTGCTTTAAGCAAAAACCAAGAGTTGAATATTGTGAAGCAAGAAATAGAAATTGCTCGCAGCGAAGTAAGAACCAGAAAAGGGGAGTACTTGCCATTTCTAAATATAGGCGCAGGTGTTGGTGTAGATAAGGTTGGGAAGTACACTCGCAATGGTGCAGTAGAGGAAAATCTTAATATTCAGCCGCACACAAAATTTCCTGAGCCATTGGGCGATTTTATGGTTGGTGTAAATTTTTCGTGGGAGTTAGATGTGTGGAAGAAACTTCGCAATAGCAAAAATGCTGCTGTACAACGCTATTTGGCAAGTGTAGAAGGTAGAAACTTTATGGTAACAAAGTTGGTTGCAGAAATAGCCAATTCGTATTATGAATTGCTTGCTTTGGATAATGAATTGGAAATGATTCAAAGAAATATTGAACTTCAACAGAATGCACTCAATATTGTGAAGCAACAAAAAGAAGCGGCACAGGTTACACAACTTGCCGTAAATCGTTTCGAAGCTCAACTGCTCAATACTCAAAATTTACAATACCAAGTAAAACAAGAAATTATTGAAACAGAGAATAAAATCAATTTTCTTACCGGTCGTTTTCCTACGCCAATTAAGCGCGATGCCGGTTCGTTTTATAGTATGGTATTTGATTCTATTTCCTCTGGCGTTCCAAGTCAGTTACTACAAAACAGACCAGATATTCGCCAAGCAGAATATGAATTAGCTGCTTCCAAATTGGATATTAAAGTTGCAAAAGCCAATTTCTATCCATCGTTCAAAATTACTGCTGCTGCTGGGTTTCAAGCATTTAATCCGGTTGTGTGGTTTAATCCTTGGTCTTTACTTTACAACGTTTTGGGTGATATGGTTGCTCCGCTTATCAATAGAAATGCTTTGGTTGCTGCTTACAAAACCTCTCGCGCAAAACAAGTGCAAGCAGTTTACAATTACGAACGTTCTATTTTAAATGCTTACAATGAAGTAGTAAATCAACTTTCCGGTATTGATAATTATACCAAAAGCCATGATACAAAAGCAAAAGAAGTGGATATTCTCTCTCAATCTATTTCAATATCAAACAACCTCTTTAAATCGGCAAGAGCAGATTATATTGAAGTATTGCTTACACAGCGCGAAGCACTAAATTCCAGAATGGAACTGATAGAAATTAAAAAGAAACAATTAGCTGCCGAAATTGATATTTACAAAGCACTTGGCGGTGGTTGGAATTAG
PROTEIN sequence
Length: 464
MLVSVGGCKLFKEPIKTENKSVPEGFNTSSQDTTNSAKVKWRNYFNDVNLIALIDTALSKNQELNIVKQEIEIARSEVRTRKGEYLPFLNIGAGVGVDKVGKYTRNGAVEENLNIQPHTKFPEPLGDFMVGVNFSWELDVWKKLRNSKNAAVQRYLASVEGRNFMVTKLVAEIANSYYELLALDNELEMIQRNIELQQNALNIVKQQKEAAQVTQLAVNRFEAQLLNTQNLQYQVKQEIIETENKINFLTGRFPTPIKRDAGSFYSMVFDSISSGVPSQLLQNRPDIRQAEYELAASKLDIKVAKANFYPSFKITAAAGFQAFNPVVWFNPWSLLYNVLGDMVAPLINRNALVAAYKTSRAKQVQAVYNYERSILNAYNEVVNQLSGIDNYTKSHDTKAKEVDILSQSISISNNLFKSARADYIEVLLTQREALNSRMELIEIKKKQLAAEIDIYKALGGGWN*