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scnpilot_solids2_trim150_scaffold_785_curated_20

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 20215..21465

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal RND efflux outer membrane protein, CzcC family n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SPW3_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 405.0
  • Bit_score: 270
  • Evalue 3.60e-69
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 425.0
  • Bit_score: 264
  • Evalue 8.10e-68
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 399.0
  • Bit_score: 459
  • Evalue 5.80e-126

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Taxonomy

RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1251
ATGAAAAAGATAGTTTCAACAATAGTATTATTGGTTTGTCTGCTCCAGCTTCACGCTCAAGACACAACTTATATTTCGCTGGAAAAGCTGTTGCAGCAGGTGGAAACCAACTACCCCGCCATTCTGCAATATCAGCAAAACATTCAGTCATGGCAGGCAAAAGCGCAGGGTGCAAAATCATGGATGCCTCCAACCTTCTCCACAGGCATTATGAATTTCCCTTACAACCTCTCAATGGTAAAGGAAAAGAACGACCCTATGAACTGGGCGGGCATTTCCTTTTCAATTGAACAGATGATACCCAACCAAACAAAGCTGAATGCCAAGCGCGATTACATCAACTCATTAGCTGAAGTTGAAAAATCTAAAAGCGACTGGACAAAAAACGAATTACGCAGAGAAGCAAAAATTCTTTACTACAACCGTTTTGTAAATCAGCAGAAACAAAAATCACTTTCAGAAAGCGAAGAAGTGTTGAACCTCTTGCTTACCACAGCCGAAGCCAAATTCAGCAGTAACCAGTCGCAACTGCAAACGATTTACAAAGCCAAAGCCCGTTTAGCCGAATTGAAAAACATGCAATACATGCTCTCCGGCTTAATTGCAGAAAGCAACATCGGTTTGAACATCCTCATGGTGCGCGATGTAAACACGCCTTTTGAAATTGATACGCTCATTCAGCCCCGCAATTATTCACTTGCAACTACCGATACCGCCAACATCACCAACCGCAGCGACATCACCGCTCTTACGAAATACATACAGTCCATGAAACTGGAACAAAAAGTAATGAAAGTAGGTGTCCGTCCCGACTTTGGTGTCCGTGCCGAACACATGCAAATGCTAGGTATGCCAAGTCAATGGTCAATTATGGGCATGATGACTATTCCTATTGTGCCTTGGTCTTCCAAAATGTATTCATCCGAAGTAAAATCTATGGGCTTTCAAATTCAGTCAATGGAATTGGAAAAACAAACCATGCAACTGATGGCTACCAAAATGTTCACCGAAAAATTAACGATGCTCCGTTACGAAAACGGACAGTATCAAAATTATAGTCAGCAAATAATTCCCGCTTACGAAAACAACATGCAAGCCAATTTACTTGCCTTCAAACAAAACACAGGCGACTTGTTTGTGCTGTTGGATGCGTGGGAAATGTTGCTGATGAAAAAATTGGAAATGTATGACCGACTGTTCAACATCTTAAAATTAGAAGCCGAATATGAATACGAGACAGAAATTAAATAG
PROTEIN sequence
Length: 417
MKKIVSTIVLLVCLLQLHAQDTTYISLEKLLQQVETNYPAILQYQQNIQSWQAKAQGAKSWMPPTFSTGIMNFPYNLSMVKEKNDPMNWAGISFSIEQMIPNQTKLNAKRDYINSLAEVEKSKSDWTKNELRREAKILYYNRFVNQQKQKSLSESEEVLNLLLTTAEAKFSSNQSQLQTIYKAKARLAELKNMQYMLSGLIAESNIGLNILMVRDVNTPFEIDTLIQPRNYSLATTDTANITNRSDITALTKYIQSMKLEQKVMKVGVRPDFGVRAEHMQMLGMPSQWSIMGMMTIPIVPWSSKMYSSEVKSMGFQIQSMELEKQTMQLMATKMFTEKLTMLRYENGQYQNYSQQIIPAYENNMQANLLAFKQNTGDLFVLLDAWEMLLMKKLEMYDRLFNILKLEAEYEYETEIK*