ggKbase home page

scnpilot_solids2_trim150_scaffold_1744_curated_9

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(11844..13091)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 424.0
  • Bit_score: 477
  • Evalue 2.70e-131
DNA topoisomerase 1 n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVC2_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 424.0
  • Bit_score: 477
  • Evalue 1.90e-131
DNA topoisomerase I similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 424.0
  • Bit_score: 477
  • Evalue 6.10e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Solitalea canadensis → Solitalea → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAGCGATGCAGAATTGGAGCGCACCATTATTTCAATTCAAAACAATAAAAACAAAGAGCTGCTGAGTGCTACAGGCGAAGTAGTTTTGTTTGAAGGATTTTTAAAAGTTTACACCGAAGGAAACGATGACGAACCTGATGCAGATAGCGAAGATTCAACCTTGTTGCCTCCTGTGAAAGTTGGGCAAGAATTGGCTTTGAGAGAAATGAATGCCACAGAGCGTTTCACTAAACCTCAACCGCGATACACCGAAGCAAGTCTTGTAAAAAAATTAGAAGAGTTGGGCATTGGTCGCCCTTCAACTTATGCGCCAACAATTTCTACCATTCAGCACAGAGAATATGTGGTAAAAGAAAACCGCGAAGGCACACAAAGAAGTTACAGAGTACTTACACTAAAAGATTCAAAAATTTCATCTGAAACCAAATCGGAAATTACCGGAGCAGAGAAAATGAAACTTTTCCCAACCGATATTGGTTCTTTAGTTACCGACTTTTTGGTAGATCATTTCGGAACAGTTTTAGATTATGGTTTCACTGCAAAAGTTGAAAAACAATTCGATGAAATTGCTGTTGGAAAATTGGAGTGGACAAAAATGATTGATGGTTTCTATCAACCATTTCACACCAATGTTTCGCAAACAGAAAAAGAAGCAAAACGAGTAACCGGAGAACGCTTGCTTGGCGAAGATCCGGAAAGCGGAGAACCTGTTTATGCAAGAATGGGGCGCTACGGTGCAATGGTGCAAATTGGCAAAGCTGATGATGAAAGCAAAAAGCCACGCTTCGCAAGTTTACGCCCTGGGCAATCCATCGAAAGCATCACATTTGAAGAAGCAATGACTTTGTTTAAACTTCCGCGCACCTTAGGCGAATTTGAAGGCAAAGAAGTAAAAGTAAATGTTGGTCGCTTTGGACCTTACGTGATGCACAACAGCAAATTTGTTTCTTTAAAAAAGGAAAACGACCCATACACCATTTCTTTAGAAGAATCAATTGAACTTATTCAAGCAAAACGCGAAGCAGAGGCTAATGCACTTATGCACGATTTTGCAGAAGAAGGAATACAGGTTTTAAAAGGCAGATTTGGGCCTTACATAAAAAAAGGGAAAGACAACTACAAAATACCTAAAGGTACAGATGCTACAACCTTAACTTTAGAAGAAGTGTTGGAAATAATAAAAGCAGCTCCTGCGCCTAAAAAGAGCGCTGCCAAAACTGCTAAAAAAGCACCTAAAAAGAAGTAA
PROTEIN sequence
Length: 416
MSDAELERTIISIQNNKNKELLSATGEVVLFEGFLKVYTEGNDDEPDADSEDSTLLPPVKVGQELALREMNATERFTKPQPRYTEASLVKKLEELGIGRPSTYAPTISTIQHREYVVKENREGTQRSYRVLTLKDSKISSETKSEITGAEKMKLFPTDIGSLVTDFLVDHFGTVLDYGFTAKVEKQFDEIAVGKLEWTKMIDGFYQPFHTNVSQTEKEAKRVTGERLLGEDPESGEPVYARMGRYGAMVQIGKADDESKKPRFASLRPGQSIESITFEEAMTLFKLPRTLGEFEGKEVKVNVGRFGPYVMHNSKFVSLKKENDPYTISLEESIELIQAKREAEANALMHDFAEEGIQVLKGRFGPYIKKGKDNYKIPKGTDATTLTLEEVLEIIKAAPAPKKSAAKTAKKAPKKK*