ggKbase home page

scnpilot_solids2_trim150_scaffold_408_curated_10

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(10646..11218)

Top 3 Functional Annotations

Value Algorithm Source
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 186.0
  • Bit_score: 228
  • Evalue 1.00e-56
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 186.0
  • Bit_score: 220
  • Evalue 3.60e-55
Crossover junction endodeoxyribonuclease RuvC id=2821680 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 185.0
  • Bit_score: 225
  • Evalue 3.50e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parabacteroides sp. HGS0025 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGGGAAATTCAACAGTAAAAAACAGCAGAATTATTTTGGGAATTGACCCTGGCACAATTGTGATGGGCTATGGCGTAATTGAGGTTGAAGAGCAACATCTGAAACTCCTTAGTATGGGCGTTGTGCAACTTTCTAAGTATGGAGATTCAGTTCAAAAACTAAAAATAATTTCAGAAAAAGTAACCGGACTCATTCACCAATACAAGCCAAAAGAATGTGCCATTGAAGCGCCTTTTTTTGGAAAGAATGTACAAAGCATGTTGAAGTTAGGCAGAGCGCAAGGTGTAGCCATTGCTGCAGCTCTTATGCAAGAAGTGGAAGTGATTGAATATGCGCCAAAAAAAATAAAGCAAAGTATAACTGGCAATGGCAATGCAGGAAAAGAACAAGTAGCTGCCATGCTTCAACACCTTTGCAAATTTACCATGCAGCCTAAATTTCTAGACGCTTCCGATGGTTTGGCAGCAGCCGTTTGCCACCATTTTCAAACTTCCGGTGGCGTAAAACCAAGTGCAGGAAAAGTATCGGGCTGGAAAGATTTTATCTCAAAAAATCAAGACAGAATAAAGTAA
PROTEIN sequence
Length: 191
MGNSTVKNSRIILGIDPGTIVMGYGVIEVEEQHLKLLSMGVVQLSKYGDSVQKLKIISEKVTGLIHQYKPKECAIEAPFFGKNVQSMLKLGRAQGVAIAAALMQEVEVIEYAPKKIKQSITGNGNAGKEQVAAMLQHLCKFTMQPKFLDASDGLAAAVCHHFQTSGGVKPSAGKVSGWKDFISKNQDRIK*