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scnpilot_solids2_trim150_scaffold_192_curated_12

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(12127..13371)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEC6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 431.0
  • Bit_score: 501
  • Evalue 9.50e-139
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 431.0
  • Bit_score: 501
  • Evalue 3.00e-139
Putative Fis family transcriptional regulator {ECO:0000313|EMBL:GAO44374.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 422.0
  • Bit_score: 501
  • Evalue 1.00e-138

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1245
ATGGAGTTACAAACTATTAAAAACCGTTTCGGAATAATTGGAAATGCACCTGCACTCAACCATGCAATAAGTATTGCAGAGCGCGTGGCATCTACCAATCTCACTGTACTCATTACAGGTGAAAGCGGTGTGGGAAAAGAAGTTTTTTCACAAATTATTCACCAGTTAGGAAGTCGAAAACATAATCCGTTTATTGCTGTAAACTGCGGTGCAATACCCGAAGGCACAATAGATTCAGAATTGTTTGGGCACGAAAAAGGCTCGTTTACAGGAGCCAGCGACCAACGCAAAGGCTACTTTGAAACTGTTGCTGGAGGAACTATTTTTTTAGATGAAGTTGGAGAATTGCCACATGGAACACAAGCACGTTTATTGCGCGTGTTAGAAACCGGAGAGTTTATCCGCGTAGGTTCCAGCAAGGTAATAAAAACCGATGTGCGAGTAGTAGCTGCAACCAATGTAAATTTACAACATGCAGTAAGTGCAGGCCGCTTTCGCGAAGATTTATATTACCGCTTAAGCACTGTGCCTATTTTTATTCCACCGCTTCGCGAAAGAGGTGATGACATTGGTTTATTATTTAGAAAGTTCTGTATAGATTTTGCTGAAAGGCATAGAATAACACCTATTCGATTAATGCCGGAAGCACAACAACTTATTTTAAAATATACTTGGCCGGGCAATGTGCGCCAGCTTAAAAATGTAGCAGAACAAGTGAGCATTTTAGCCACAGAAAGAGATATTTCAGCAGCTCAACTCATTTCTATTGTTCCTGATATTGCAGAAAATAAATTGCCTGTAGTGTTATCAAATTCAGGTGGATTTGAAAATAATTCCGGCAACGGTTTCACTGAGCGTGAAATTTTGTACAAACTTATTTTTGACTTAAAAAAAGATTTAAACGATTTAAAACATTTTGTTTTCGATATTGCCAAAGGTGGCGTTTCTTCTAATTCTTTCGAAGAAAGAAGTATTCCTGAGCCTGTAGCTTTTCAAAGAAATATAAATCCGCAGCCGGTAATTATTTCACCCGAAAATCATCAAGTAATTATTAGCGAGAAGCCTACTGTTTTCCATGAACATGAAACAGTAGAAGAAAACCTATCGCTGGTAGATAAAGAACTCGAATTGATTGTAAAAGCGCTAAAAAAACATCGTAACAAACGTAGAGATGCGGCTGCGGATTTAGGTATTTCGGAAAGAACTTTGTACCGAAAAATTAAGGAATATAATTTAGACGAATAG
PROTEIN sequence
Length: 415
MELQTIKNRFGIIGNAPALNHAISIAERVASTNLTVLITGESGVGKEVFSQIIHQLGSRKHNPFIAVNCGAIPEGTIDSELFGHEKGSFTGASDQRKGYFETVAGGTIFLDEVGELPHGTQARLLRVLETGEFIRVGSSKVIKTDVRVVAATNVNLQHAVSAGRFREDLYYRLSTVPIFIPPLRERGDDIGLLFRKFCIDFAERHRITPIRLMPEAQQLILKYTWPGNVRQLKNVAEQVSILATERDISAAQLISIVPDIAENKLPVVLSNSGGFENNSGNGFTEREILYKLIFDLKKDLNDLKHFVFDIAKGGVSSNSFEERSIPEPVAFQRNINPQPVIISPENHQVIISEKPTVFHEHETVEENLSLVDKELELIVKALKKHRNKRRDAAADLGISERTLYRKIKEYNLDE*