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scnpilot_solids2_trim150_scaffold_4395_curated_4

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(3636..4433)

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Joostella marina DSM 19592 RepID=I3C6W0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 265.0
  • Bit_score: 378
  • Evalue 4.60e-102
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EIJ39353.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 265.0
  • Bit_score: 378
  • Evalue 6.40e-102
HlyD family secretion protein; K15727 cobalt-zinc-cadmium resistance protein CzcB similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 265.0
  • Bit_score: 372
  • Evalue 1.30e-100

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Taxonomy

Joostella marina → Joostella → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 798
GAAAGCCAGGGCCGTCTGCAATTTCTTGAACAGGAATACCAACGTCAGCAGAAACTGAGAGAAGAAGATGTGAATGCCGCAAAAACCTTTCAGCAGGTAGCATCAGACTACAAGGTTATGCAAGCCAGAATTAGCGGCCTTGAACAGCGTCTGGCCTTGGCAGGTATCAGCAGGTCCGCTTTGCAAACCGGAAAAATAACAAGAACAGCTAATCTGTACGCTCCTATTACAGGATATATCAAGACCAGTAATGTGAATATTGGTAAATACGCAACTCCAACAGATGTGTTATTTGAGATTATCAATAAGAATGATCTTCACCTGGCCTTAAATGCTTTTGAAAAGGATTTGGGAAAAATACAGGTAGGTCAAACCGTTAAGTTTTCATTAGCCAATGAGAATAATTTTAACCGCACAGCAAAGATATTTTTAATCGGTCAATCAACAGGGGATGATCGCATTGTGCCGGTACATTGTCATTTTGTAAATCAAAAAGACCCTGACCTTTTACCTGGTATGTACGTGAAGGCCTGGATCGAGACAGGTTCAGAAAAACAATATGCCGCACCCTCCGAAGCAATTGTTCAGTTAGAAGGAAAGGACTACCTGATCTCGCAAACGGGACAATCGTCAAATGGATATACTTTTCAGTTAATGCAAGTTAAAAAAGGAACAGAACAGGAAGGTTATACTGCGGTAACACTGCCTGAAAATATGACCGTTGAAAACACTAAAGTGGTTGTTAAGAATGCTTACGCTATTCTGTCTGCATTAAAAAATTCGGAAGAAACAGAATAA
PROTEIN sequence
Length: 266
ESQGRLQFLEQEYQRQQKLREEDVNAAKTFQQVASDYKVMQARISGLEQRLALAGISRSALQTGKITRTANLYAPITGYIKTSNVNIGKYATPTDVLFEIINKNDLHLALNAFEKDLGKIQVGQTVKFSLANENNFNRTAKIFLIGQSTGDDRIVPVHCHFVNQKDPDLLPGMYVKAWIETGSEKQYAAPSEAIVQLEGKDYLISQTGQSSNGYTFQLMQVKKGTEQEGYTAVTLPENMTVENTKVVVKNAYAILSALKNSEETE*