ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_117_curated_17

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 26736..27422

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1411022 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 1/3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 220.0
  • Bit_score: 297
  • Evalue 2.10e-77
tetrapyrrole (corrin/porphyrin) methylase (EC:2.1.1.107); K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 220.0
  • Bit_score: 295
  • Evalue 1.80e-77
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M6Q2_GRAFK similarity UNIREF
DB: UNIREF100
  • Identity: 63.6
  • Coverage: 220.0
  • Bit_score: 295
  • Evalue 5.70e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tannerella sp. oral taxon BU063 → Tannerella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 687
ATGAGTACTGCGCCTTGCCTTGTAGTTGTTCCTACGCCCATTGGCAATTTGGAAGATATTACACTTCGCGCATTAAACGTGTTGAAAGATGCCGATTTAATTTTAGCTGAAGATACGCGCCAAACACACAAATTGCTTGCGCATTACAACATACAAAAACCGATGCACGCGCATCATGCTTTTAACGAGCACAAAACGGTAATGAACGTGATTGATAGATTGCGTGCCGGACAAAAAATTGCATTGGTGAGCGATTGCGGTACTCCTGCCATTTCCGATCCTGGTTTTTTACTGGTGCGGAGTTGCTTGCAAGAAGGCATTGCTGTGGAATGCTTGCCCGGAGCTACGGCTTTTGTGCCCGCGTTGGTAGTTTCCGGCTTACCGGCTGATGAGTTTGTGTTTATGGGTTTTTTACCACATAAAAAAGGTAGAGAAACAGCTATAAAAAAAATTGCAGAAGAAAGCAGAACCGTTATTATTTACGAATCTCCATATCGCGTGGTGAAGTTCTTAGAAGCACTAAACAAATTTGCATCACCAGAACGCAAAGTGAGCGCCAGCCGAGAATTGAGCAAAAAATTTGAAGAAACCATACGCGGCACCGCAGCCGAAGTTTTGCAGCATTTTACCACCAACGAACCAAGAGGCGAATTTGTGATAGTGATTGGTGGAAAGGAAGTAGAATAA
PROTEIN sequence
Length: 229
MSTAPCLVVVPTPIGNLEDITLRALNVLKDADLILAEDTRQTHKLLAHYNIQKPMHAHHAFNEHKTVMNVIDRLRAGQKIALVSDCGTPAISDPGFLLVRSCLQEGIAVECLPGATAFVPALVVSGLPADEFVFMGFLPHKKGRETAIKKIAEESRTVIIYESPYRVVKFLEALNKFASPERKVSASRELSKKFEETIRGTAAEVLQHFTTNEPRGEFVIVIGGKEVE*