ggKbase home page

scnpilot_solids2_trim150_scaffold_117_curated_80

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(102516..103112)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 199.0
  • Bit_score: 257
  • Evalue 2.10e-65
RNase HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 198.0
  • Bit_score: 250
  • Evalue 5.80e-64
Ribonuclease HII n=1 Tax=Formosa sp. AK20 RepID=M7MDZ1_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 197.0
  • Bit_score: 253
  • Evalue 1.70e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGTTGCTAAGTAATTACCAATCATTATTTCCCGAAGCAGGTTGCGATGAAGCCGGAAGAGGCTGCTTGGCAGGACCTGTGGTTGCAGCAGCAGTTATTTTTCCAAAGAATTATGAGAACGAACTTCTAAATGATTCTAAAAAGCTAAGTGAAGAAAAACGAGAACATTTAGCTATTCAAGTTAAGGCTGATGCTTTGGCTTATGCTGTTGCGTTTGTAGATGAAAAAACAATTGATTCTATAAACATACTTAATGCTTCCATTTTGGCAATGCACAACGCCTTAAAATCGCTTGCAGTGCAACCGCAATTTATTATAGTAGATGGAAACAAATTTAAGCCTTATCAGAATATTCCGCACCAAACAATAGTGCAAGGTGATGGAAAGTATTTGAGTATTGCAGCGGCATCAATTTTAGCTAAAACTGCCCGTGATGAATACATGCAAAATCTTCATGCAGAATTTCCTTTGTACCAATGGAATAAAAACAAAGGCTATGCAACAGAAGTTCACCGAAATGCAGTGATAAAATATGGGCAAACTCCTTACCACAGAAAGAGTTTTGTGTTGAAATCGCAGTTAAGTTTGTTTAGCTAA
PROTEIN sequence
Length: 199
MLLSNYQSLFPEAGCDEAGRGCLAGPVVAAAVIFPKNYENELLNDSKKLSEEKREHLAIQVKADALAYAVAFVDEKTIDSINILNASILAMHNALKSLAVQPQFIIVDGNKFKPYQNIPHQTIVQGDGKYLSIAAASILAKTARDEYMQNLHAEFPLYQWNKNKGYATEVHRNAVIKYGQTPYHRKSFVLKSQLSLFS*