ggKbase home page

scnpilot_solids2_trim150_scaffold_692_curated_9

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 10324..11016

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein RadC n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248F615 similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 221.0
  • Bit_score: 170
  • Evalue 2.10e-39
DNA repair protein {ECO:0000313|EMBL:KIX19828.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 229.0
  • Bit_score: 168
  • Evalue 8.70e-39
DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 36.8
  • Coverage: 182.0
  • Bit_score: 129
  • Evalue 1.30e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. 316 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 693
ATGAAACTTACAGTGAATATAGAAAAACTAACCATCAACCATGCTTTGGATATTTACGAGACGATGCAGATGGTTCTTAAAAGAGAGAAGAAGCTTAATACAGCTAAAGAACATTTCTGGGTCATTGCTTTAAACAATGCTAACCGAATACTGAATATTGAACTGGTTTCAACAGGCAGTACTAGCAACGTAATTGTAAGGCCCATGGAGGTGCTTAGTATACCACTTCAGAAAAGGGCTACAGGAGTGATACTAGTTCACAACCATCCCAGTGGCCGCCTCGAACCATCCGAAGAGGATAAGGAGTTAACAGATTGCTTAATACAAGCATGTAGGCTGATGAAGACACCAGTACTTGATCATGTGATTATTACAGAAAACAGTTATTATAGCTTTCAAACTTCTGGGCTTTTAGAGCGCTTAGAAGCGAGTATTAAGTATGTACTTCCTTACGAACTAGAAAAGCAGTTTCATGCTGAAATGGAAGCAGAAGTAAAAAGGATAAAGGAGGAAAGTCAGGAGAAAATTGAGGAAAGTTTAAAAATAGGAGAGGAGGTAGGATTAAAGAAGGGTGAAGAAATAGGAATAGAAAAGATTGCTAGGCAAATGCTTAAAGATGGAACACCTATAGATCATATTGTAAGATGGACAGGGCTTGGCGTGCAGGAAATAGAAAAATTCAAGAAGGAGTAA
PROTEIN sequence
Length: 231
MKLTVNIEKLTINHALDIYETMQMVLKREKKLNTAKEHFWVIALNNANRILNIELVSTGSTSNVIVRPMEVLSIPLQKRATGVILVHNHPSGRLEPSEEDKELTDCLIQACRLMKTPVLDHVIITENSYYSFQTSGLLERLEASIKYVLPYELEKQFHAEMEAEVKRIKEESQEKIEESLKIGEEVGLKKGEEIGIEKIARQMLKDGTPIDHIVRWTGLGVQEIEKFKKE*