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scnpilot_solids2_trim150_scaffold_2057_curated_4

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: comp(5395..5955)

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 185.0
  • Bit_score: 231
  • Evalue 8.90e-58
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 185.0
  • Bit_score: 223
  • Evalue 7.10e-56
Peptidyl-tRNA hydrolase n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HT03_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 185.0
  • Bit_score: 231
  • Evalue 6.30e-58

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Taxonomy

Sphingobacterium paucimobilis → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
GTGAGTTTTTTAATTGCAGGACTTGGAAATGTAGGCGATGAATATTCAGGCACCAGACATAATATTGGATTTGACGTTGTAGATAATCTGGCACAAAAAGCAGGAGCAACCTTTGCGCTCGATCGCCATGCCTACTTTGCAACTTACCGTTCGCGCGGCAAAAATATTTACCTTATTAAGCCAACTACTTTTATGAATTTGAGTGGTAAGGCTGTGAGATATTGGATGACAGAATTAAAAATTCAACAACAAAATTTATTGGTTGTTTTAGATGACTTAGCTATTCCTTTTGGCTCTATTCGCTTGCGCGGAAAAGGCGCAGATGGAGGACACAACGGGCTAAAAGACATTGATGCCACGCTTGGCAATGGCAACTACGCACGCTTGCGTTTTGGCATTGGCAGCAACTACCCAAAAGGCGCACAGGTTCATTTTGTTTTAGGAAAATGGAATAATGAAGAGCAAAAGCAACTGCCGGAATTATTGCAAAAATCTGCTGATGCGGCAACGGCTTTTATGTTTGAAGGCTTAGAGCGCGCAATGACAAAGTTCAACAAATAA
PROTEIN sequence
Length: 187
VSFLIAGLGNVGDEYSGTRHNIGFDVVDNLAQKAGATFALDRHAYFATYRSRGKNIYLIKPTTFMNLSGKAVRYWMTELKIQQQNLLVVLDDLAIPFGSIRLRGKGADGGHNGLKDIDATLGNGNYARLRFGIGSNYPKGAQVHFVLGKWNNEEQKQLPELLQKSADAATAFMFEGLERAMTKFNK*