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scnpilot_solids2_trim150_scaffold_299_curated_2

Organism: solids_Bacteroidetes_1

near complete RP 49 / 55 BSCG 46 / 51 ASCG 13 / 38 MC: 1
Location: 2532..3005

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993}; Short=HMG aldolase {ECO:0000256|RuleBase:RU004338};; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004338};; EC=4.1.3.17 {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993};; Oxaloacetate decarboxylase {ECO:0000256|RuleBase:RU004338}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 157.0
  • Bit_score: 197
  • Evalue 1.20e-47
ribonuclease activity regulator protein RraA (EC:2.1.1.-); K02553 regulator of ribonuclease activity A similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 157.0
  • Bit_score: 193
  • Evalue 3.90e-47
ribonuclease n=1 Tax=Aquaspirillum serpens RepID=UPI0003B72389 similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 155.0
  • Bit_score: 197
  • Evalue 8.60e-48

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Taxonomy

Candidatus Competibacter denitrificans → Candidatus Competibacter → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGAATACTGCTGATTTAAGCGATCAATTTCCAGAGCTTGTAAAAGCCGCAGAACCAATGTTTAAAGACTTTGGCGGCACAAAAAAATTTAGTGGTGAAATTGTTACTCTCAAAATTTTTGAAGACAATTCTTTAGTACGAAAAATGCTGGAGCAAAACGGCTCCGGAAAAGTATTAGTAGTTGATGGCGGAGGCTCTTTGCGATGCGCTTTATTGGGTGATAAATTGGGTGAATTAGCTGTGAAAAACTTATGGCAGGGTTTAATAATTTATGGCTGCGTTCGCGATAGCGCAGTATTAAAGGAGCTGCATTTAGGTGTAAAAGCGCTTAATACCCATCCTTTTAAAACCGTAAAAAGAAACGAAGGCCAAGAACAAATAAAAGTAACCTTTGCAGGCGTAGATTTTGTGCCCGGGCATTTCGTTACTATTGATGAAGACGGTATTTTAGTAAGTGAGCAACGTTTATTCTAA
PROTEIN sequence
Length: 158
MNTADLSDQFPELVKAAEPMFKDFGGTKKFSGEIVTLKIFEDNSLVRKMLEQNGSGKVLVVDGGGSLRCALLGDKLGELAVKNLWQGLIIYGCVRDSAVLKELHLGVKALNTHPFKTVKRNEGQEQIKVTFAGVDFVPGHFVTIDEDGILVSEQRLF*