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scnpilot_solids2_trim150_scaffold_26_curated

Search features with annotation key words

Displaying items 121-150 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_26_curated_121
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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125440..127044
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
phosphoenolpyruvate carboxykinase; K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVW1_9FLAO
scnpilot_solids2_trim150_scaffold_26_curated_122
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(127115..127531)
DNA (417bp) protein (139aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase n=2 Tax=Elizabethkingia anophelis RepID=H0KS74_9FLAO
scnpilot_solids2_trim150_scaffold_26_curated_123
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(127621..128709)
DNA (1089bp) protein (363aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000256|SAAS:SAAS00019792};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2G2_FLAB3
scnpilot_solids2_trim150_scaffold_26_curated_124
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(128806..129174)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=4 Tax=Elizabethkingia RepID=H0KPS8_9FLAO
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12
scnpilot_solids2_trim150_scaffold_26_curated_125
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(129223..129816)
DNA (594bp) protein (198aa)
50S ribosomal protein L10 n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SV59_9FLAO
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
scnpilot_solids2_trim150_scaffold_26_curated_126
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(129829..130521)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K8F2_9FLAO
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
scnpilot_solids2_trim150_scaffold_26_curated_127
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(130533..130976)
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CDK3_9FLAO
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
50S ribosomal protein L19; K02867 large subunit ribosomal protein L11
scnpilot_solids2_trim150_scaffold_26_curated_128
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(131140..131835)
DNA (696bp) protein (232aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CPK4_9FLAO
SOS mutagenesis and repair protein UmuC {ECO:0000313|EMBL:KFF09026.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
umuC; UmuC protein; K03502 DNA polymerase V
scnpilot_solids2_trim150_scaffold_26_curated_129
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(131871..132164)
DNA (294bp) protein (98aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K03502 DNA polymerase V
ImpB/MucB/SamB family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVF2_9FLAO
DNA polymerase V subunit UmuC {ECO:0000313|EMBL:BAP29367.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
scnpilot_solids2_trim150_scaffold_26_curated_130
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(132265..132807)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=2 Tax=Bergeyella zoohelcum RepID=K1LM09_9FLAO
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG
scnpilot_solids2_trim150_scaffold_26_curated_131
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(132822..133028)
DNA (207bp) protein (69aa)
Protein translocase subunit SecE n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYX6_9FLAO
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
hypothetical protein; K03073 preprotein translocase subunit SecE
scnpilot_solids2_trim150_scaffold_26_curated_132
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(133164..134351)
DNA (1188bp) protein (396aa)
Elongation factor Tu n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CMS4_ELIME
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
translation elongation factor 1a (ef-1a/ef-tu); K02358 elongation factor Tu
scnpilot_solids2_trim150_scaffold_26_curated_133
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(135348..135638)
DNA (291bp) protein (97aa)
Ribosome hibernation protein YhbH n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CLR8_ELIME
Ribosome hibernation protein YhbH {ECO:0000313|EMBL:EOR30289.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
Ribosome hibernation protein YhbH; K05808 putative sigma-54 modulation protein
scnpilot_solids2_trim150_scaffold_26_curated_134
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(135690..136565)
DNA (876bp) protein (292aa)
Tyrosine recombinase XerC n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYW7_9FLAO
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
Integrase, site-specific recombinase; K03733 integrase/recombinase XerC
scnpilot_solids2_trim150_scaffold_26_curated_135
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(136638..136835)
DNA (198bp) protein (66aa)
30S ribosomal protein S21 n=3 Tax=Elizabethkingia RepID=H0KPR6_9FLAO
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_26_curated_136
unknown

Not on your lists

comp(136846..137016)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_26_curated_137
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

137041..140727
DNA (3687bp) protein (1229aa)
Gliding motility-associated C-terminal domain containing protein (Fragment) n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CBK0_9FLAO
Gliding motility-associated C-terminal domain containing protein {ECO:0000313|EMBL:EJL68151.1}; Flags: Fragment;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
PKD domain-containing protein
scnpilot_solids2_trim150_scaffold_26_curated_138
unknown

Not on your lists

comp(140742..141158)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI0003702773
scnpilot_solids2_trim150_scaffold_26_curated_139
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(141272..141910)
DNA (639bp) protein (213aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Dephospho-CoA kinase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K4F1_9FLAO
hypothetical protein
scnpilot_solids2_trim150_scaffold_26_curated_140
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(142003..142869)
DNA (867bp) protein (289aa)
Metallo-beta-lactamase domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYT8_9FLAO
Beta-lactamase {ECO:0000313|EMBL:KIC64604.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
Beta-lactamase-like protein
scnpilot_solids2_trim150_scaffold_26_curated_141
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(142919..143941)
DNA (1023bp) protein (341aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2I4_FLAB3
scnpilot_solids2_trim150_scaffold_26_curated_142
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

143984..145306
DNA (1323bp) protein (441aa)
Imidazolonepropionase {ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|SAAS:SAAS00083112};; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
imidazolonepropionase (EC:3.5.2.7); K01468 imidazolonepropionase [EC:3.5.2.7]
Imidazolonepropionase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K4F5_9FLAO
scnpilot_solids2_trim150_scaffold_26_curated_143
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

145309..146226
DNA (918bp) protein (306aa)
Formimidoylglutamase {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446}; EC=3.5.3.8 {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446};; Formiminoglutamase {ECO:0000256|HAMAP-Rule:MF_00737}; Formiminoglutamate hydrolase {ECO:0000256|HAMAP-Rule:MF_00737}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
formiminoglutamase (EC:3.5.3.8); K01479 formiminoglutamase [EC:3.5.3.8]
Formimidoylglutamase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYU2_9FLAO
scnpilot_solids2_trim150_scaffold_26_curated_144
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

146303..147598
DNA (1296bp) protein (432aa)
Succinate-semialdehyde dehydrogenase (NAD) (EC:1.2.1.16 1.2.1.24); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate-semialdehyde dehydrogenase (NAD) n=3 Tax=Elizabethkingia RepID=H0KPP4_9FLAO
Aldehyde dehydrogenase {ECO:0000313|EMBL:KFC36685.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica (Chryseobacterium meningosepticum).;"
scnpilot_solids2_trim150_scaffold_26_curated_145
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

147665..148870
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3Z5_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU07133.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
scnpilot_solids2_trim150_scaffold_26_curated_146
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


149020..150021
DNA (1002bp) protein (334aa)
Protein RecA n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZB7_9FLAO
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
RecA protein; K03553 recombination protein RecA
scnpilot_solids2_trim150_scaffold_26_curated_147
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

150212..152101
DNA (1890bp) protein (630aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZB4_9FLAO
Chaperone protein HtpG {ECO:0000256|SAAS:SAAS00218406}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
heat shock protein 90; K04079 molecular chaperone HtpG
scnpilot_solids2_trim150_scaffold_26_curated_148
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(152164..152487)
DNA (324bp) protein (108aa)
Methylated-DNA--protein-cysteine methyltransferase n=2 Tax=Elizabethkingia anophelis RepID=H0KNK0_9FLAO
Cysteine methyltransferase {ECO:0000313|EMBL:KIA84396.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
methylated-DNA-(protein)-cysteine s-methyltransferase DNA binding protein; K07443 methylated-DNA-protein-cysteine methyltransferase related protein
scnpilot_solids2_trim150_scaffold_26_curated_149
unknown

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comp(152694..153839)
DNA (1146bp) protein (382aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_26_curated_150
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(153981..154322)
DNA (342bp) protein (114aa)
Integral membrane protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2KSW0_9FLAO
Membrane protein {ECO:0000313|EMBL:KFF27563.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
Displaying items 121-150 of 197 in total

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