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scnpilot_solids2_trim150_scaffold_26_curated_96

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: 91326..94682

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 999.99
  • Bit_score: 1815
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 999.99
  • Bit_score: 1774
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JIE8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 999.99
  • Bit_score: 1782
  • Evalue 0.0

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Taxonomy

Chryseobacterium solincola → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3357
ATGAAGTTAAAAAATATCAGCGATACGCTGTTGCCTTATCTTTTAAAAAAGAATTTCGGACAAGAGCTTTTTCATGAACTCGAAACGAGTGACAGCATTTCTGTAAAAGGTTTTGCCGGTTCTGCGCCGTCACTTTTTGTAGCTGAGTTGTATCTGATTCAAAAAAAAACCATTTTATTTCTGTTAGATGATAAGGAAGAAAGTTTGTACGCTACTTCGGAACTGGAAGAGCTTTTGGGTAAAGAACATGTATTGTATTTTCCGCCTTCGCATCTCGAACCTTATCAGATCGAAAAAGTTCAGAATGCCAATTTAGTGTTGCGAACCGAAGTCTTGAACCGTCTGAATTCTGAGAATAAACCGAAAGTTATTGTAGCTCCGTTTGCGGCTTTAAATGAAAAAGTTTTGAAAAAAGAAGATTTCAAAGCGATTTCTCACACCATCAAAGTAGGCGATTCCCTGGATTTCGATTTTGTGGATGAATTGCTTATGCATTATAATTTCACGCAGGCGGATTTCGTTTCAGAACCCGGAGAATTTTCTGTACGCGGCGGAATTGTAGATGTTTTTTCCTACGCCAACGAAGAGCCTTATCGTATCACTTTTTTCGGAAGTGAAGTGGAAAGTATTAAAACATTTGATATCGAAACTCAGCTTTCCAAAGAGAAAATAAAGCAATTTGAGCTGGTTTCCAATATGAATTACACGGTTTCGGGCGGCAAGGTTTCTTTTTTTGATTTGTTTAAAACGGACAGTTTTATTGTTTCAAAAAACGCTTTTTTGGGTGAAAAGAAAATTCGTGAATTTTACGAAAAAGCAGAAATTAATTTTGAAAAATTAAGTAAGGAACTGAAACATCAAACCCGGGAAGAACTTTTTATTTCGGAAGAAATTCTTGCGGAAAATCTAAAGAAATTCAAATGGATTGATTTTACTTCTCAGCCGCTCCGCAATTCTCAAACTCCAATACTTTTAAATCAGACTCAGCAGCCTGGTTTTCATAAGAATTTTGAACTTCTGGCTGAAGATTTAAAAAACAAAAGAGACCAAGGTTATGATACATGGATTTCCTTTACATCAGAAAAACAAAAAGACAGGCTGGAAAGTATTCTTGAAGAATTGAATCATGAGGTCTATTTCAAAAGCTTTCGGTCCGAACTGCATGAAGGTTTTGTAGATCCTCAACTAATGATTTCGGTGTACACGGATCATCAGATTTTTGACCGTTACCAAAGGTTTCAGGCAAAGAACACTTTTGCCAAATCTGAACAGTTGACTCTAAAAGATTTGATGTCTCTGAAAATAGGAGATTACATCGCTCATATCGATCATGGTATCGGGAAATTCATGGGATTGGTGAAGATTAATAATAACGGAAAAGTGCAGGAATGTTTCAAACTGGTGTATAAAAATCAGGATTTGCTGTATGTTTCCATTCATTCACTTCATAAAATATCGAAATACAATGGTCCGGATGGAAGAGAAATCGTACTGTCCAAATTGGGTTCACCGGCCTGGAAATCTTTAAAACAAAAAACAAAAGCCAAGGTAAAACAAATCGCTTTCGATCTGATAAAACTGTATGCAGAAAGAAAAACCGCGAAAGGATTTGCTTTCACGCCCGATTCGTATCTTCAGAATGAACTGGAGGCTAGTTTTATTTACGAAGACACGCCCGATCAGGAAAAAGCAACTTTGGATGTGAAAAAAGACATGGAAGCCCAAACTGTGATGGACAGATTGGTGTGTGGCGATGTTGGATTCGGGAAAACGGAAGTAGCGATTCGTGCGGCATTCAAAGCGGCTACGGATGGAAAGCAAGTCGCTGTTTTGGTTCCGACCACGATTTTGGCATTTCAGCATTACCGCAGTTTCAAGGAAAGACTGAAGGATTTCCCGGTAACGATTTCTTATCTGAACCGTTTTCGTACCGCAAAACAAAAATCTGAAACTAAAGATGGTTTGAAAAATGGGAAAATTGATATCGTCATTGGAACGCATCAACTGGTGGGAAAAGATATTGTTTTCAAAGATCTGGGACTTTTGATCATTGATGAAGAGCATAAATTCGGGGTGAATGTGAAAGATAAACTTAAAACGCTAAAAAGTAATATTGATACGCTGACGCTTACCGCAACTCCCATTCCCAGAACCTTACAGTTTTCGCTGATGGCAGCACGGGATTTATCAGTTATTAAAACGCCCCCGCCCAATCGTCAGCCGGTGGAAACGCAGGTGATTGGCTTTAACGAAGAAATTATTCGCGATGCTGTAGCTTATGAAATTCAGCGTGACGGACAGGTCTTTTTCATCAACAACAGAATTGAAAATCTGAAAGATATTGCCGGATTAATTCAAAGATTAGTTCCGGAAGCCAAAGTAATAACGGGTCATGGCCAAATGGAAGGGAAGCAACTGGAACAAAATGTTCTGGATTTTATGGAAGGGAAATATGATGTTTTAGTTTCTACCACTATTGTAGAATCGGGAGTGGATGTGCCAAATGCCAATACTATTTTCATCAACGATGCCCAGAAATTCGGAATGGCGGATCTCCACCAAATGCGCGGAAGAGTAGGACGAAGCAATCGAAAAGCTTTTTGTTATTTGATTACGCCGCCGTATGATATGATTACTTCCGATGCGCGGAAACGTTTGGAAGCTATTGAGCAGTTTTCAGATTTGGGAAGTGGTTTTCAGATTGCGATGAAAGATCTGGAAATTCGTGGTGCCGGAGATTTATTGGGTGCGGAACAGAGTGGATTCATCAACGAAATGGGCTTTGAAACGTATCAGAAAATTATGCAGGAAGCACTGGAAGAACTTCAAAATGACGAGACTTTTGAAAATCTTTTTGAAAGCGAAGAAGAACGTAAGAAATTGATCAACACCACCAAAGACGTCAATATTGACACCGATATGGAACTGATGCTCCCGGATTCTTATGTTCAGAGTACGGAAGAAAGACTTTCCTTATATCAAAAACTCGCAGGAATTCCGAACAAAACCGAATTGCAGAAATTTGAAAGTGAACTGATCGATCGTTTTGGAAATTTACCACAAGAAGCCCAAAATCTTCTGAAATCTGTGGAGCTGAAGTGGCTTGCTTCCGATATTGGTTTTGAGAAAATTGTAGTAAAAAACGGAATTTTTCTGGGATATTTTCCGGCTAATCCGCAGGATAAGTTTTATGCAAGCGAGAAATTCAGGCATATCATCACTTATCTGACGTCCAATCCAATGGAAGCAACTTTAAAAGAAAAACATTCTAAGGACGGCAACCAACTCATGATGCGGAAAGAAAATGTGAAAAACGTAGACGAAGTAACTGATGTTTTAGAGAGAATTTTAAAATAA
PROTEIN sequence
Length: 1119
MKLKNISDTLLPYLLKKNFGQELFHELETSDSISVKGFAGSAPSLFVAELYLIQKKTILFLLDDKEESLYATSELEELLGKEHVLYFPPSHLEPYQIEKVQNANLVLRTEVLNRLNSENKPKVIVAPFAALNEKVLKKEDFKAISHTIKVGDSLDFDFVDELLMHYNFTQADFVSEPGEFSVRGGIVDVFSYANEEPYRITFFGSEVESIKTFDIETQLSKEKIKQFELVSNMNYTVSGGKVSFFDLFKTDSFIVSKNAFLGEKKIREFYEKAEINFEKLSKELKHQTREELFISEEILAENLKKFKWIDFTSQPLRNSQTPILLNQTQQPGFHKNFELLAEDLKNKRDQGYDTWISFTSEKQKDRLESILEELNHEVYFKSFRSELHEGFVDPQLMISVYTDHQIFDRYQRFQAKNTFAKSEQLTLKDLMSLKIGDYIAHIDHGIGKFMGLVKINNNGKVQECFKLVYKNQDLLYVSIHSLHKISKYNGPDGREIVLSKLGSPAWKSLKQKTKAKVKQIAFDLIKLYAERKTAKGFAFTPDSYLQNELEASFIYEDTPDQEKATLDVKKDMEAQTVMDRLVCGDVGFGKTEVAIRAAFKAATDGKQVAVLVPTTILAFQHYRSFKERLKDFPVTISYLNRFRTAKQKSETKDGLKNGKIDIVIGTHQLVGKDIVFKDLGLLIIDEEHKFGVNVKDKLKTLKSNIDTLTLTATPIPRTLQFSLMAARDLSVIKTPPPNRQPVETQVIGFNEEIIRDAVAYEIQRDGQVFFINNRIENLKDIAGLIQRLVPEAKVITGHGQMEGKQLEQNVLDFMEGKYDVLVSTTIVESGVDVPNANTIFINDAQKFGMADLHQMRGRVGRSNRKAFCYLITPPYDMITSDARKRLEAIEQFSDLGSGFQIAMKDLEIRGAGDLLGAEQSGFINEMGFETYQKIMQEALEELQNDETFENLFESEEERKKLINTTKDVNIDTDMELMLPDSYVQSTEERLSLYQKLAGIPNKTELQKFESELIDRFGNLPQEAQNLLKSVELKWLASDIGFEKIVVKNGIFLGYFPANPQDKFYASEKFRHIITYLTSNPMEATLKEKHSKDGNQLMMRKENVKNVDEVTDVLERILK*