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scnpilot_solids2_trim150_scaffold_87_curated_35

Organism: solids_Chryseobacterium_1

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: comp(39235..40083)

Top 3 Functional Annotations

Value Algorithm Source
Tetracycline regulation of excision, RteC n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6U4_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 275.0
  • Bit_score: 490
  • Evalue 1.10e-135
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:CDS98990.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 275.0
  • Bit_score: 491
  • Evalue 9.40e-136
Tetracycline regulation of excision, RteC similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 275.0
  • Bit_score: 490
  • Evalue 3.60e-136

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Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 849
TTGAAACTTCAAGTAACCGGAATGAATAAATTTTACTACGAAACTTTACAAAGAATAGAAACAGCAATCAGCGAATTAGAAATTGAAACCGATTGCCCAATACAAAGGATAGAAGCGGTTGTACACCATATTCTTGAATGCCTGTCCGAATTGAAAGAGTATGTTCTGAAAAGAGGGTTTAAGAATACCGATGAAGAAATCCGCTTTTTCAAATATCAGAAACCTGTCATCGTTGCTAAACTCATTTACTACAATGCCATTTACAAAATAGAGACAAAGAAACCCTATGGTGCAAAGCCCATCAGGAAATACCTCAAAAAAGAACTGAAAAAGCTAAAGAGGTTCTTTGACAACAACCTCGATTTTTACAAGTATTACCGTAGCAACAACTCGTTCCTTGACGAGAAATATTTCGTTCGGGGCAACCACGATATAAAGTTATGGTTGGATACCTATTATTTCCAGTCTGACCAGTCCTTTTCCACTTCGCATGATTACAAGGTCGCCAAGATAATAGCCAACGATTTGATACAGGTTTACATCGAAGACCAGTTGTATAACAAATTCCAAAAAAATAAATCGAAAGCCCAAAAGAAGCTGAAATGGACAGGTAGCAAAGTGGCATTGATAGAACTGATTTATGCCCTGCATTACCAAAATGTGTTTGACAACGGGAACAACGACATAAGAGAAGTAGCCCAATATTTTGAAAGTGCCTTTGGCATTGATTTGGGTAATTTTTACCAAACGTATTTAGAATTGCGAAACAGGAAGATGAACCCGACAAAATTCCTTGATGCACTTCGGGAGGAACTTATCAAGAAAATGGACGAGCAGGGCGAAAAATAG
PROTEIN sequence
Length: 283
LKLQVTGMNKFYYETLQRIETAISELEIETDCPIQRIEAVVHHILECLSELKEYVLKRGFKNTDEEIRFFKYQKPVIVAKLIYYNAIYKIETKKPYGAKPIRKYLKKELKKLKRFFDNNLDFYKYYRSNNSFLDEKYFVRGNHDIKLWLDTYYFQSDQSFSTSHDYKVAKIIANDLIQVYIEDQLYNKFQKNKSKAQKKLKWTGSKVALIELIYALHYQNVFDNGNNDIREVAQYFESAFGIDLGNFYQTYLELRNRKMNPTKFLDALREELIKKMDEQGEK*