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scnpilot_solids2_trim150_scaffold_8606_curated_2

Organism: solids_Cytophagia_1

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(754..1479)

Top 3 Functional Annotations

Value Algorithm Source
Initiator RepB protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EQU9_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 232.0
  • Bit_score: 195
  • Evalue 6.50e-47
initiator RepB protein similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 232.0
  • Bit_score: 195
  • Evalue 2.00e-47
Initiator RepB protein {ECO:0000313|EMBL:AEI51990.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 232.0
  • Bit_score: 195
  • Evalue 9.10e-47

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 726
ATGTCTAAAAAAGTTATCAAGCAACATAATGCTATTACAGAAGCACGTTATGAATTGTCTCCCTTGGAGAAGAATATTCTATATATGCTGCTAGCTCAGCTAAAGGAGGACGATCCGGAAGATAAGAGTTATTATAAAATTAGTTTCCATGAGCTAGAAAAGCGCTTCGGTAAAAAATTAACTATTCCTACACTGATTGAAGCTGCAGAAGGGTTAGTATTCCGTGTTTATACTATACGAAAAGAAAATGGAAATATTTTATTGACTACACTTATATCCTCAGTAACTAACTTACCAGAAGAGAAAAGTATTGAATTGGGGATTAGCTCTATGGCTAGACCTTACCTATTTGATCTTAAGAAAGATTATACTGAATTTGAGTTAGACATTGCTTTAAAATTAAAGAGTAAATATTCCAAGCGTATTTATGAAATGATCTGTGAACATAAGAAAGAAGGCAAGCTTACTATATCAGTAGAAGATTTAAAAGATCGTTTCCATTTGTTAGATTCCAAAACAGGCGAAGATAAATATCCGGGTTGGTCTATGTTTGCTAAGCATATTTTGGAAATTCCTCAAAAGGAATTAGATGAGATTGCAGATCTAACCTTTAACTACATACCTAAAAAAACTGGGAAAAAATTTACGCATATAGAATTTACTATACTGCCTAATTCTAAAAAAGAAGCTAAGTATGAAGAAGGTCTGTTTGATACTAAAGAATGA
PROTEIN sequence
Length: 242
MSKKVIKQHNAITEARYELSPLEKNILYMLLAQLKEDDPEDKSYYKISFHELEKRFGKKLTIPTLIEAAEGLVFRVYTIRKENGNILLTTLISSVTNLPEEKSIELGISSMARPYLFDLKKDYTEFELDIALKLKSKYSKRIYEMICEHKKEGKLTISVEDLKDRFHLLDSKTGEDKYPGWSMFAKHILEIPQKELDEIADLTFNYIPKKTGKKFTHIEFTILPNSKKEAKYEEGLFDTKE*