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scnpilot_solids2_trim150_scaffold_1898_curated_6

Organism: solids_Cytophagia_1

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(6683..7375)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 230.0
  • Bit_score: 438
  • Evalue 1.70e-120
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 230.0
  • Bit_score: 438
  • Evalue 7.70e-120
tRNA pseudouridine synthase B n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ERF7_AMOA5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 230.0
  • Bit_score: 438
  • Evalue 5.50e-120

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Taxonomy

Candidatus Amoebophilus asiaticus → Candidatus Amoebophilus → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 693
ATGGAATTGCAACAATTAAACCACCCAGAAGGAACCATGGTCCTTATTAATAAACCATTAGGCTGGACGTCTTTTGATATAGTAAAAAAGCTTAGAAATACTTTTAAAATAAAGAAAATAGGACATGCTGGTACCCTAGATCCTTTAGCTACAGGGCTTTTAATTATTTGTACAGAAAAGAAAACCAAAACCATAAGTCACTATCAAGAATTAACCAAGGTTTATACTGGCCAGCTAGTATTAGGCAAAACAACACCTTCTATTGACCTAGAAACACCTTTTGACAGCTCTGTTCCATATGATCATATTACTGAGACAGCTATATACGAGCTAGCACAAACTTTTATAGGCTGTATTACACAAATTCCCCCTGCCTACTCAGCTATAAAAACTAAAGGAGTTAGAGCCTACAAAAAGGCAAGAGAAGGTAGCCAACCTGACTTACAGTCTAGAGAGGTGGCTATCAAGGATTTTACTATTACTGCTATTGATTTACCATCTGTTAATTTTGAGATTACTTGTAGCAAAGGAACCTATATACGCAGTATTGTACGTGATTTTGGAGAAAGATTAGGTGCAGGGGCTTATTTGTCAAAGCTATGCAGAACTCATATAGGCCCATATAGCCTCAATGAAGCTTATGAAATAGAAGATCTTACAAAGTTGGATGATTCACGCTTAAACATTTTATAG
PROTEIN sequence
Length: 231
MELQQLNHPEGTMVLINKPLGWTSFDIVKKLRNTFKIKKIGHAGTLDPLATGLLIICTEKKTKTISHYQELTKVYTGQLVLGKTTPSIDLETPFDSSVPYDHITETAIYELAQTFIGCITQIPPAYSAIKTKGVRAYKKAREGSQPDLQSREVAIKDFTITAIDLPSVNFEITCSKGTYIRSIVRDFGERLGAGAYLSKLCRTHIGPYSLNEAYEIEDLTKLDDSRLNIL*