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scnpilot_solids2_trim150_scaffold_336_curated_2

Organism: solids_Cytophagia_1

near complete RP 49 / 55 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(763..1602)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 264.0
  • Bit_score: 217
  • Evalue 3.40e-53
ribosome small subunit-dependent GTPase A; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 264.0
  • Bit_score: 215
  • Evalue 2.90e-53
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QEH2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 264.0
  • Bit_score: 217
  • Evalue 2.40e-53

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Taxonomy

Thermaerobacter subterraneus → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 840
ATGGTAGAGGTTTATATACCTAGCAAGAAAGAATTTGTTTTACTTTCTGTTTCTACAAAGATAAGTCCTCTAGTAGTGGGGGATAAGGTTATAATAAATAATAATGAACTGGTAACAATATTACACAGAGAAAAAGTTCTATTTCGCTTGCGTGGAGATAATACACGTTATTCTATCCATACTAAACATACACATGTGCTGGCTGCTAACATTGATATGGTTGTAATAGTTGCAGCTGTTGCCAATCCTGCTTTTCATCCAAGATTTGTAGATCGCTTTTTGATACTTTGCCAATACTGTGAAATTCCAGCATTACTTTGCTTGAATAAGTGTGACATTACTCATGCGCGCAATAAAATACTAAATTGGTATAGAGACTGTTTAAAATTACCTATTATAGAAACCTCTGTTACTACTGGCATAGGTATAAAAGTGTTACAAGAGAATATTCAGGGCAAAATGGTTGCTCTGGTAGGTCATAGTGGAGTTGGTAAAACTTCTATTTTAAATTTCCTTCTTCCAACAAGCACATGTCTTAGAACACAGGATGTGGGACATAAAGGAAAAGGACGTCATACTACTACTGCTTCTAATTTATATACTTTATCTTATAATACTTATATTATTGATATACCTGGTATACGTGCACTAAATACAGAAGCAATCCCACGTGAATATCTGAAACATTATTTCAGCGAGTTTTCCACATATACATGTAAGTACCACAATTGTTATCATGATCAAGAGCCTGGCTGTGGAGTAAAAGAAGCTGCACAACGTGATAGTATTTTTATGAGTAGATATCAGAGTTATCTTAGCATGCTTAAAGGTTATAGGTAA
PROTEIN sequence
Length: 280
MVEVYIPSKKEFVLLSVSTKISPLVVGDKVIINNNELVTILHREKVLFRLRGDNTRYSIHTKHTHVLAANIDMVVIVAAVANPAFHPRFVDRFLILCQYCEIPALLCLNKCDITHARNKILNWYRDCLKLPIIETSVTTGIGIKVLQENIQGKMVALVGHSGVGKTSILNFLLPTSTCLRTQDVGHKGKGRHTTTASNLYTLSYNTYIIDIPGIRALNTEAIPREYLKHYFSEFSTYTCKYHNCYHDQEPGCGVKEAAQRDSIFMSRYQSYLSMLKGYR*