ggKbase home page

scnpilot_solids2_trim150_scaffold_47_curated_102

Organism: solids_Flavobacteriia_1

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(132387..133154)

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Pedobacter agri RepID=UPI00029AF9DB similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 253.0
  • Bit_score: 180
  • Evalue 1.80e-42
integral membrane sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 258.0
  • Bit_score: 174
  • Evalue 5.20e-41
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 260.0
  • Bit_score: 192
  • Evalue 8.20e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Fluviicola_43_260 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 768
ATGATCATCGGAGAGGGAAGTGTCTTTTTGTTTATCATCATTTTTGCATTCAGCAGATTAATTGTTTCCCTGAAAAAAGAAAGCAGACTCAACGAGCAGAAAAACAACTTTTTGATGTCGATTACGCACGAGCTGAAAACACCGATTGCACATAATAAGCTCACATTACAGACGCTACTTAAAAGAAAAAATATTGAAGAAACGGCACGCATAGATCTGACTGAAAAAGTGCTGGCGGAAAATACGCGCCTGGAGCACCTGGTAGAGAATATTTTAACAGCAACGCGGTTAGAAACTAATTACTTTAAGCTGAACAAAGAAAAGTTTGATTTCTATATTCTTGTGAACGAGCTGATTAAACGGTACTCTATTTTGCTGGGAGATGCCCAGATAAACGTCATAAGAAATACTGAAAAAACAATTGTCAATGCAGACCAATCAATGATTGAAACCGTTATCATCAACATCATTGAAAATTATCATAAATATGCGTTAGATTCGAAAGAGTTTAATATTATTCTTTCTACTTTTGGAGACAGAGTAAAATGCTCTTTTACGGATATGGGAGAAGGAGTTCCTGCTGAATTTCAAAGGGATATTTTTAAGAAATTTGTCCGTGCTGAAAATGAAGAGGTAAGGACGAAAAAAGGAACCGGTCTCGGATTGTATATCTCTAAGGAATTTTTGAAGCTCAACCAGGGAACCATCTCTTTTACACCGAATAAGCCGAAAGGAGCAGTTTTTGAAATAACATTACCATTAGCATGA
PROTEIN sequence
Length: 256
MIIGEGSVFLFIIIFAFSRLIVSLKKESRLNEQKNNFLMSITHELKTPIAHNKLTLQTLLKRKNIEETARIDLTEKVLAENTRLEHLVENILTATRLETNYFKLNKEKFDFYILVNELIKRYSILLGDAQINVIRNTEKTIVNADQSMIETVIINIIENYHKYALDSKEFNIILSTFGDRVKCSFTDMGEGVPAEFQRDIFKKFVRAENEEVRTKKGTGLGLYISKEFLKLNQGTISFTPNKPKGAVFEITLPLA*