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scnpilot_solids2_trim150_scaffold_212_curated_19

Organism: solids_Flavobacteriia_1

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: 15685..17139

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 54 subunit, RpoN/SigL n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHK0_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 486.0
  • Bit_score: 739
  • Evalue 1.90e-210
RNA polymerase sigma-54 subunit RpoN/SigL; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 486.0
  • Bit_score: 739
  • Evalue 5.80e-211
RNA polymerase, sigma 54 subunit, RpoN/SigL {ECO:0000313|EMBL:AEA43765.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 486.0
  • Bit_score: 739
  • Evalue 2.60e-210

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Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1455
ATGGCTTTAAAACAATACCTTGGTCAGAAGTTAGAACAGCGCCTGAGCCCTCAGCAGATTCAGCTGATGAAACTACTACAGGTTCCTACAATGGAGCTTGACCAGAGAATCAAACAGGAAATAGAGGAAAATCCTGCTCTGGAAGAAGGTAAGGAACTGGAAGAAGATTTCGAAAATGAGCGCGAAGAAGATTTCGACGATTCGAACATCGAGAATGAACGGGAAGATTTTGACCTCTCCGACTATATGGATGATGACACTCCTGACTACAAAACACAGGTAAATAACCGCAGCAAGGACGATGAAGAACGTGTAATTCCGTACAGCGGTGAACAAACTTTCCAAGACCGCCTGCTGGAACAGCTCTATATGCTTGACCTGGATGAAACACAGTTTATCATTGCAAATACCATCATAGGAAACCTGGATGAATCAGGTTATCTCAACAGAGAAATTGATGCGATTGTTGATGATCTTGCATTTACCCTGAACATCATGGTAACGGAAGAGCAGGTGGAAGAAGTGCTCACGCTTGTTCAGGAGCTTGATCCCGCCGGTGTCGGAGCAAGAGATTTAAAAGAATGCCTGTTAATTCAAATCAACCGTAAACAAGACGGAGATATTACCAAATTTACCGCTAAAAAAATATTAGAAGATCACTTCGAGGAATTTACGAAAAAACATTACGACAAAATCCAGAAGAAGCTTGAAATAGAGGACGAAGACCTGAAAGAAGCGATCGCGGAAATCATCAAATTAAACCCGAAGCCCGGCGGTTCCGGAAAAGAAGCCGCAAAATCAATGATCCAGATCATCCCGGATTTTTATATCCAGGAATTTGACGGAAAGCTGGAAATATCACTGAACGGAAGAAACGCGCCGGAATTACATGTAAGCAGAGATTATGCAACAATGCTCCGTAATTATGCCGAAGGGGCGAAAACTTCAAAGGCAGACAAAGAAGCGCTGCAATTCGTAAAACAAAAATTAGACAGCGCAAAATGGTTTATTGATGCCATCAAGCAACGGCAAAATACCTTGTTGACCACCATGGAGGCCATTGTCGCTTACCAGCGGGAATTCTTCATATCCGGAGATGAGTCAAATCTTAAGCCGATGATCCTGAAAGATATATCAAACATGATCGGCCTGGATATTTCTACTATTTCCCGCGTTGCCAACAGCAAATACGTTCAGACAAATTTCGGCATTTACCCGCTCAAATATTTCTTCTCTGAATCACTTTCCACCGACAGTGGTGAAGAAGTGTCCACACGGGAAGTCAAAAAAATTCTTTCCGAAGCGATCGAAGCGGAAGAAAAGCGGCGGCCGCTTACAGATGACCGGTTGGCGCAGCTGCTGAATGAAAAAGGATACAATATCGCCAGACGAACTATTGCCAAATACCGCGAACAGCTGAACATTCCGGTTGCGAGATTAAGAAAAGAGCTCTGA
PROTEIN sequence
Length: 485
MALKQYLGQKLEQRLSPQQIQLMKLLQVPTMELDQRIKQEIEENPALEEGKELEEDFENEREEDFDDSNIENEREDFDLSDYMDDDTPDYKTQVNNRSKDDEERVIPYSGEQTFQDRLLEQLYMLDLDETQFIIANTIIGNLDESGYLNREIDAIVDDLAFTLNIMVTEEQVEEVLTLVQELDPAGVGARDLKECLLIQINRKQDGDITKFTAKKILEDHFEEFTKKHYDKIQKKLEIEDEDLKEAIAEIIKLNPKPGGSGKEAAKSMIQIIPDFYIQEFDGKLEISLNGRNAPELHVSRDYATMLRNYAEGAKTSKADKEALQFVKQKLDSAKWFIDAIKQRQNTLLTTMEAIVAYQREFFISGDESNLKPMILKDISNMIGLDISTISRVANSKYVQTNFGIYPLKYFFSESLSTDSGEEVSTREVKKILSEAIEAEEKRRPLTDDRLAQLLNEKGYNIARRTIAKYREQLNIPVARLRKEL*