ggKbase home page

scnpilot_solids2_trim150_scaffold_6_curated_134

Organism: solids_Flavobacteriia_1

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(136370..136729)

Top 3 Functional Annotations

Value Algorithm Source
UPF0102 protein HMPREF9331_00614 n=1 Tax=Capnocytophaga granulosa ATCC 51502 RepID=S2WQ49_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 119.0
  • Bit_score: 113
  • Evalue 1.20e-22
UPF0102 protein P278_24640 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 117.0
  • Bit_score: 116
  • Evalue 2.70e-23
putative endonuclease related to Holliday junction resolvase similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 118.0
  • Bit_score: 110
  • Evalue 4.30e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Zhouia amylolytica → Zhouia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 360
ATGTCGGGGAATATTGACACAGGCAAAAAAGGAGAAGCGATCGCGCGTGAGTATCTCACCGGGATCGGATATGAATTTCTTGCCGACGGCTATCGGTTTCAGCATCTTGAAATAGATCTGATCTTCGAATATGAGAATACGCTGGTCATTGTGGAAGTGAAAACAAGAAATACCACAGTGTTCGGAGCACCTTACGAAGCGGTTACACGCCAGAAGCAAAAACAACTGATCAGAGCGGCAAACCAGTATATTTTACAGCATGATCTTGATAAAGAAGTGCGGTTCGATATTATTTCGATTGTATTAAAAAATGAGGGTTCCCATGAATTAGAGCATATCACGGATGCTTTTGTGCCGTGA
PROTEIN sequence
Length: 120
MSGNIDTGKKGEAIAREYLTGIGYEFLADGYRFQHLEIDLIFEYENTLVIVEVKTRNTTVFGAPYEAVTRQKQKQLIRAANQYILQHDLDKEVRFDIISIVLKNEGSHELEHITDAFVP*