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scnpilot_solids2_trim150_scaffold_194_curated_84

Organism: solids_Flavobacteriia_1

near complete RP 52 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(100562..101755)

Top 3 Functional Annotations

Value Algorithm Source
Type I restriction modification DNA specificity domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9M1_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 404.0
  • Bit_score: 259
  • Evalue 7.90e-66
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EEC90523.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.1
  • Coverage: 404.0
  • Bit_score: 259
  • Evalue 1.10e-65
hsdS1; Restriction endonuclease S subunits similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 358.0
  • Bit_score: 228
  • Evalue 4.70e-57

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Taxonomy

Holdemanella biformis → Holdemanella → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1194
ATGACAGAAAAAAGAAAAAATATAGATAAGGTTCCAAATTTGAGATTTCCTGAATTTGAAGACGAGTGGGAAAAGAAAAAATTTTCAAAGTATATCAAACTTTTCAGAGGTAGTTCTCCGAGACCTATTGTTAAATTTATAACCAAAGATGAAAATGGTGTTAATTGGATAAAAATTGGAGATACAAAAAATACTGATAACTCAATTATTAATAATGTTGAAGAAAAAATAACAATTGAAGGAGCAAGGAAATCAAGAAAAGTAACCAACGGTGAATTAATCTTAGCAAATTCTATGAGTTTTGGCAAGACATATCAATTATCAATTGATGGATATATCTATGATGGTTGGTTTGTTTTAAGAGAATATGAAAATTATTTTGAAAAGTCATTTTTACTTCAATTATTAAATTCAGATTATTTACAAAAACAATATAAAAGATTGTCTGCCGGTGGGGTTGTTCAAAATATAAGCAGTGAGATTGTTTATGAAACAATTCTTATCCGACCTTCATTACAAGAACAAAAGAAAATATCGTCTTTTCTTTCTTTAATTGATGAAAATATTACAACCCAAAGGAAAACAATTGAGGAGTTAAACACACTAAAAAAAGGAATTGCCCAAAAAATATTTTCGCAACAATTAAGGTTTAAAGATGATAACAGAAATGATTTTCCTGAATGGAAGGAAATAGATTTGGAAAATGTGTGTGAAATAAAGAAAGGTGAACAATTTAATAAAGAAGAATTAGACGAAACAGGTTTATATCCTTGTTTAAATGGTGGAGTTTCTCCGTCTGGATTTTCAGAAAAATACAATACAGACGAAAACACTATTACAATTAGTGAAGGTGGAAATTCTTGTGGATTTGTAAATTTTATGACAACAAAATTTTGGCTTGGAGGACATTGCTATAAAATTTTACTCTCACAAAATATAAACTTGTTGTATTTCTACCAAATATTAAAATATAATGAGCAAAAAATTATGAGTTTACGAGTCGGTTCTGGTCTGCCAAATATTCAGTTGAAAGATTTAAAAAAATTGAAAATCAAAATTAGTTTAGCAGAAAGTGAACAACAAAAAATAACCAATTTCCTATCTTCAATTGACTCAAAAATTGACATTGAAAATCGGATTTTACAGAAGTTGGAAGAACAAAAAAAATACTTTTTAGCCAATTTGTTTATATAA
PROTEIN sequence
Length: 398
MTEKRKNIDKVPNLRFPEFEDEWEKKKFSKYIKLFRGSSPRPIVKFITKDENGVNWIKIGDTKNTDNSIINNVEEKITIEGARKSRKVTNGELILANSMSFGKTYQLSIDGYIYDGWFVLREYENYFEKSFLLQLLNSDYLQKQYKRLSAGGVVQNISSEIVYETILIRPSLQEQKKISSFLSLIDENITTQRKTIEELNTLKKGIAQKIFSQQLRFKDDNRNDFPEWKEIDLENVCEIKKGEQFNKEELDETGLYPCLNGGVSPSGFSEKYNTDENTITISEGGNSCGFVNFMTTKFWLGGHCYKILLSQNINLLYFYQILKYNEQKIMSLRVGSGLPNIQLKDLKKLKIKISLAESEQQKITNFLSSIDSKIDIENRILQKLEEQKKYFLANLFI*