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scnpilot_solids2_trim150_scaffold_99_curated

Search features with annotation key words

Displaying items 31-60 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_99_curated_31
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31570..32016
DNA (447bp) protein (149aa)
Resolvase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQQ0_9RHIZ
Resolvase {ECO:0000313|EMBL:EIM71902.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
resolvase family site-specific recombinase
scnpilot_solids2_trim150_scaffold_99_curated_32
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31974..32378
DNA (405bp) protein (135aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Rhizobium sp. CF080 RepID=J3AU77_9RHIZ
Resolvase domain-containing protein {ECO:0000313|EMBL:EUB96497.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
scnpilot_solids2_trim150_scaffold_99_curated_33
unknown

Not on your lists

comp(32297..32596)
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_99_curated_34
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33131..33334)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IY45_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:EZQ16234.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_99_curated_35
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33436..33654)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7L7_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX20463.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_99_curated_36
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33698..33865)
DNA (168bp) protein (56aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFW1_9RHIZ
UPF0391 membrane protein CF98_19750 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Protein of unknown function (DUF1328)
scnpilot_solids2_trim150_scaffold_99_curated_37
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33985..35244)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJ42_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY96322.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
scnpilot_solids2_trim150_scaffold_99_curated_38
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35269..36555)
DNA (1287bp) protein (429aa)
lytic transglycosylase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003103F99
Lytic murein transglycosylase {ECO:0000313|EMBL:EHK57688.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
lytic murein transglycosylase
scnpilot_solids2_trim150_scaffold_99_curated_39
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36751..37656
DNA (906bp) protein (302aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9); K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UPI0003D01131 related cluster n=1 Tax=unknown RepID=UPI0003D01131
scnpilot_solids2_trim150_scaffold_99_curated_40
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37693..38190)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AK5_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65570.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_99_curated_41
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38199..38549)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AK4_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG65571.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_99_curated_42
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38680..40464)
DNA (1785bp) protein (595aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003718B58
Uncharacterized protein {ECO:0000313|EMBL:CCV05504.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_99_curated_43
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40648..41646
DNA (999bp) protein (333aa)
D-arabinose 5-phosphate isomerase {ECO:0000313|EMBL:CCV16081.1}; EC=5.3.1.13 {ECO:0000313|EMBL:CCV16081.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
KpsF/GutQ family protein (EC:5.3.1.13)
D-arabinose 5-phosphate isomerase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIA1_9RHIZ
scnpilot_solids2_trim150_scaffold_99_curated_44
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41652..42113)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11ER2_MESSB
hypothetical protein; K07340 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG64113.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
scnpilot_solids2_trim150_scaffold_99_curated_45
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42120..43076)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BYH9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM74631.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_99_curated_46
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43172..44209)
DNA (1038bp) protein (346aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hemH; ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase n=1 Tax=Nitratireductor indicus C115 RepID=K2NSR3_9RHIZ
scnpilot_solids2_trim150_scaffold_99_curated_47
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44284..46455)
DNA (2172bp) protein (724aa)
5'-nucleotidase {ECO:0000313|EMBL:CDX32032.1}; EC=3.1.3.5 {ECO:0000313|EMBL:CDX32032.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
5'-nucleotidase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FFJ3_9RHIZ
5'-Nucleotidase domain-containing protein
scnpilot_solids2_trim150_scaffold_99_curated_48
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46487..47740)
DNA (1254bp) protein (418aa)
Phenylacetate-CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30]
Phenylacetate-CoA ligase n=1 Tax=Nitratireductor indicus C115 RepID=K2NSQ1_9RHIZ
Phenylacetate-CoA ligase {ECO:0000313|EMBL:EKF42375.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids2_trim150_scaffold_99_curated_49
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47816..48187)
DNA (372bp) protein (124aa)
Outer membrane lipoprotein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MYR8_9RHIZ
Outer membrane lipoprotein {ECO:0000313|EMBL:EKF17108.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
outer membrane lipoprotein
scnpilot_solids2_trim150_scaffold_99_curated_50
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48297..49742)
DNA (1446bp) protein (482aa)
homospermidine synthase; K00808 homospermidine synthase [EC:2.5.1.44]
homospermidine synthase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F568CB
Homospermidine synthase {ECO:0000313|EMBL:ESW90013.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
scnpilot_solids2_trim150_scaffold_99_curated_51
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49836..50759)
DNA (924bp) protein (308aa)
UPI0003CF05C4 related cluster n=1 Tax=unknown RepID=UPI0003CF05C4
Protein of unknown function (DUF3445)
Uncharacterized protein {ECO:0000313|EMBL:ESY88533.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
scnpilot_solids2_trim150_scaffold_99_curated_52
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50773..51447)
DNA (675bp) protein (225aa)
hypothetical protein; K02619 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
UPI0003D01164 related cluster n=1 Tax=unknown RepID=UPI0003D01164
Uncharacterized protein {ECO:0000313|EMBL:CDX11339.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
scnpilot_solids2_trim150_scaffold_99_curated_53
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51396..52607)
DNA (1212bp) protein (404aa)
Aminodeoxychorismate synthase {ECO:0000313|EMBL:EHK57703.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EHK57703.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
para-aminobenzoate synthase subunit I; K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85]
aminodeoxychorismate synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E8A08
scnpilot_solids2_trim150_scaffold_99_curated_54
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52656..54509)
DNA (1854bp) protein (618aa)
oligoendopeptidase; K08602 oligoendopeptidase F [EC:3.4.24.-]
UPI0003D01492 related cluster n=1 Tax=unknown RepID=UPI0003D01492
Oligoendopeptidase F {ECO:0000313|EMBL:ESZ29177.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
scnpilot_solids2_trim150_scaffold_99_curated_55
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54645..56168
DNA (1524bp) protein (508aa)
UPI0003CF3C49 related cluster n=1 Tax=unknown RepID=UPI0003CF3C49
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:CDX11348.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Fis family two component sigma-54 specific transcriptional regulator
scnpilot_solids2_trim150_scaffold_99_curated_56
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56382..58106
DNA (1725bp) protein (575aa)
UPI0003CF08F8 related cluster n=1 Tax=unknown RepID=UPI0003CF08F8
Peptidase M15 {ECO:0000313|EMBL:ESY96307.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_99_curated_57
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58128..58769)
DNA (642bp) protein (214aa)
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase {ECO:0000313|EMBL:EIM74644.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EIM74644.1};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BYJ2_9RHIZ
scnpilot_solids2_trim150_scaffold_99_curated_58
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58848..59753)
DNA (906bp) protein (302aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7N8_9RHIZ
Peptidoglycan-binding protein {ECO:0000313|EMBL:EXL09546.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
peptidoglycan binding domain-containing protein
scnpilot_solids2_trim150_scaffold_99_curated_59
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60001..60858
DNA (858bp) protein (286aa)
UPF0176 protein MEA186_00280 n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y2B8_9RHIZ
UPF0176 protein MPLA_140363 {ECO:0000256|HAMAP-Rule:MF_00469}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
Rhodanese domain-containing protein; K07146 UPF0176 protein
scnpilot_solids2_trim150_scaffold_99_curated_60
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60964..61662
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037002AE
Uncharacterized protein {ECO:0000313|EMBL:CDX11357.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
Displaying items 31-60 of 151 in total

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