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scnpilot_solids2_trim150_scaffold_145_curated

Search features with annotation key words

Displaying items 91-109 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_145_curated_91
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(82967..84103)
DNA (1137bp) protein (379aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000255|HAMAP-Rule:MF_00300}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
chorismate synthase n=1 Tax=Rhizobium loti RepID=UPI0003770FB8
scnpilot_solids2_trim150_scaffold_145_curated_92
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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84272..84538
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00038132AE
Protein of unknown function (DUF1344)
Uncharacterized protein {ECO:0000313|EMBL:ESY85023.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
scnpilot_solids2_trim150_scaffold_145_curated_93
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(84545..85138)
DNA (594bp) protein (198aa)
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Phosphoglycerate mutase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZV5_9RHIZ
Phosphoglycerate mutase {ECO:0000313|EMBL:EHK53708.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
scnpilot_solids2_trim150_scaffold_145_curated_94
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85166..85984)
DNA (819bp) protein (273aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
short-chain dehydrogenase/reductase SDR; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9]
enoyl-ACP reductase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002ED01BA
scnpilot_solids2_trim150_scaffold_145_curated_95
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(86113..87048)
DNA (936bp) protein (312aa)
UPI0003CEB3A5 related cluster n=1 Tax=unknown RepID=UPI0003CEB3A5
Molecular chaperone DnaJ {ECO:0000313|EMBL:ESW94017.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
heat shock protein DnaJ domain-containing protein
scnpilot_solids2_trim150_scaffold_145_curated_96
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87138..87545)
DNA (408bp) protein (136aa)
UPI0003CFA324 related cluster n=1 Tax=unknown RepID=UPI0003CFA324
Uncharacterized protein {ECO:0000313|EMBL:ESZ19440.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_145_curated_97
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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87621..88238
DNA (618bp) protein (206aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5); K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8Z5_MESCW
scnpilot_solids2_trim150_scaffold_145_curated_98
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(88538..89290)
DNA (753bp) protein (251aa)
UPI0003D004CF related cluster n=1 Tax=unknown RepID=UPI0003D004CF
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CDX18336.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
enoyl-CoA hydratase/isomerase
scnpilot_solids2_trim150_scaffold_145_curated_99
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(89499..91271)
DNA (1773bp) protein (591aa)
Acyl-CoA dehydrogenase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KTX7_MESAW
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB47449.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_145_curated_100
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91434..92612
DNA (1179bp) protein (393aa)
Glycoside hydrolase family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZU4_9RHIZ
Glycoside hydrolase family protein {ECO:0000313|EMBL:EHK53797.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
glycoside hydrolase family protein
scnpilot_solids2_trim150_scaffold_145_curated_101
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92847..94352
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FSR5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX82510.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
glycosyltransferase
scnpilot_solids2_trim150_scaffold_145_curated_102
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94410..95672)
DNA (1263bp) protein (421aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZU0_9RHIZ
scnpilot_solids2_trim150_scaffold_145_curated_103
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95852..96835
DNA (984bp) protein (328aa)
ubiA; 4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-]
UPI0003D02AE6 related cluster n=1 Tax=unknown RepID=UPI0003D02AE6
4-hydroxybenzoate polyprenyltransferase {ECO:0000313|EMBL:ESZ19448.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
scnpilot_solids2_trim150_scaffold_145_curated_104
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(96854..97417)
DNA (564bp) protein (188aa)
UPI0003CE4A17 related cluster n=1 Tax=unknown RepID=UPI0003CE4A17
Uncharacterized protein {ECO:0000313|EMBL:CDX45936.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_145_curated_105
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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97935..98144
DNA (210bp) protein (70aa)
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380A540
Cold-shock protein {ECO:0000313|EMBL:EXL09899.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
scnpilot_solids2_trim150_scaffold_145_curated_106
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98252..98476
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003728397
Uncharacterized protein {ECO:0000313|EMBL:CDX20658.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_145_curated_107
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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98541..98804
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VX82_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ22030.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_145_curated_108
unknown

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99041..99412
DNA (372bp) protein (124aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_145_curated_109
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99449..100879)
DNA (1431bp) protein (477aa)
D-2-hydroxyacid dehydrogenase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G7L0_9RHIZ
D-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:ESY25020.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
oxidoreductase
Displaying items 91-109 of 109 in total

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