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scnpilot_solids2_trim150_scaffold_5_curated

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Displaying items 61-90 of 349 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_5_curated_61
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(69671..70555)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4V8_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13193.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_62
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70671..72908)
DNA (2238bp) protein (746aa)
Two-component sensor/response regulator hybrid n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HIZ7_9RHIZ
Two-component sensor/response regulator hybrid {ECO:0000313|EMBL:EHK59292.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
two-component sensor/response regulator hybrid
scnpilot_solids2_trim150_scaffold_5_curated_63
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73040..74032)
DNA (993bp) protein (331aa)
Dehydrogenase (Zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HIZ5_9RHIZ
Dehydrogenase (Zinc-binding alcohol dehydrogenase, NADPH quinone oxidoreductase, oxidoreductase) {ECO:0000313|EMBL:EHK59290.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
dehydrogenase
scnpilot_solids2_trim150_scaffold_5_curated_64
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74079..74585)
DNA (507bp) protein (169aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
UPI0003CEE3F2 related cluster n=1 Tax=unknown RepID=UPI0003CEE3F2
scnpilot_solids2_trim150_scaffold_5_curated_65
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74582..75424)
DNA (843bp) protein (281aa)
UPI0003CEAE43 related cluster n=1 Tax=unknown RepID=UPI0003CEAE43
RNA methyltransferase {ECO:0000313|EMBL:EXL09659.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
rRNA methylase
scnpilot_solids2_trim150_scaffold_5_curated_66
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75421..76473)
DNA (1053bp) protein (351aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
UPI0003CFB6CB related cluster n=1 Tax=unknown RepID=UPI0003CFB6CB
SAM-dependent methlyltransferase {ECO:0000313|EMBL:ESZ22214.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
scnpilot_solids2_trim150_scaffold_5_curated_67
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76507..76848)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003791F74
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13184.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_68
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(77005..77286)
DNA (282bp) protein (94aa)
Integration host factor subunit beta n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C116_9RHIZ
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
integration host factor subunit beta; K05788 integration host factor subunit beta
scnpilot_solids2_trim150_scaffold_5_curated_69
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77368..78309)
DNA (942bp) protein (314aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGX4_MESAW
signal peptide peptidase SppA, 36K type
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:AGB44256.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_5_curated_70
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78609..79334
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DBC08F
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59281.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein; K11719 lipopolysaccharide export system protein LptC
scnpilot_solids2_trim150_scaffold_5_curated_71
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79309..79911
DNA (603bp) protein (201aa)
OstA-like protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C113_9RHIZ
OstA-like protein {ECO:0000313|EMBL:EIM75515.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
OstA family protein; K09774 lipopolysaccharide export system protein LptA
scnpilot_solids2_trim150_scaffold_5_curated_72
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79913..80710
DNA (798bp) protein (266aa)
ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
ABC transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4U4_9RHIZ
ABC transporter {ECO:0000313|EMBL:EHH13179.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
scnpilot_solids2_trim150_scaffold_5_curated_73
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80924..82183
DNA (1260bp) protein (420aa)
ABC-type branched-chain amino acid transport systems n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W5P1_MAGSA
ABC-type branched-chain amino acid transport systems; K01999 branched-chain amino acid transport system substrate-binding protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
scnpilot_solids2_trim150_scaffold_5_curated_74
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82251..83123
DNA (873bp) protein (291aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P083_AZOS1
livH; branched-chain amino acid transport system permease protein; K01997 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
scnpilot_solids2_trim150_scaffold_5_curated_75
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83120..84130
DNA (1011bp) protein (337aa)
Branched-chain amino acid transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P084_AZOS1
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:EWY39758.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
livM; branched-chain amino acid transport system permease protein; K01998 branched-chain amino acid transport system permease protein
scnpilot_solids2_trim150_scaffold_5_curated_76
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84127..84873
DNA (747bp) protein (249aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4G3_MAGSA
ABC-type branched-chain amino acid transport systems, ATPase component; K01995 branched-chain amino acid transport system ATP-binding protein
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:BAE51262.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_solids2_trim150_scaffold_5_curated_77
bacterium YEK0313, Bacteria

Not on your lists

84873..85577
DNA (705bp) protein (235aa)
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAW7_9RHOB
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:CEJ10329.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative branched-chain amino acid ABC transporter, ATP-binding component (livF-like)
scnpilot_solids2_trim150_scaffold_5_curated_78
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85589..88738)
DNA (3150bp) protein (1050aa)
RND multidrug efflux transporter n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XW94_RHIRD
RND multidrug efflux transporter {ECO:0000313|EMBL:EHH05379.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
Putative component of multidrug efflux pump, acrB/acrD/acrF family
scnpilot_solids2_trim150_scaffold_5_curated_79
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88746..89933)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003136A95
Acriflavine resistance protein A {ECO:0000313|EMBL:EYR77788.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putative component of multidrug efflux pump, acrB/acrD/acrF family
scnpilot_solids2_trim150_scaffold_5_curated_80
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90099..91040)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FA4CAA
Inosine-uridine nucleoside N-ribohydrolase
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:AGB44265.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_5_curated_81
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91158..91583
DNA (426bp) protein (142aa)
UPI0003CF599A related cluster n=1 Tax=unknown RepID=UPI0003CF599A
Heat shock protein Hsp20 {ECO:0000313|EMBL:ESY77798.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
heat shock protein Hsp20
scnpilot_solids2_trim150_scaffold_5_curated_82
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91645..91902
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C107_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM75509.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_5_curated_83
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92083..92547)
DNA (465bp) protein (155aa)
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69]
nitrogen regulatory protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379493B
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EKF44404.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
scnpilot_solids2_trim150_scaffold_5_curated_84
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92619..93197)
DNA (579bp) protein (193aa)
Sigma-54 modulation protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C110_9RHIZ
Sigma-54 modulation protein {ECO:0000313|EMBL:EIM75512.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
sigma-54 modulation protein
scnpilot_solids2_trim150_scaffold_5_curated_85
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93556..95079)
DNA (1524bp) protein (508aa)
UPI0003D05625 related cluster n=1 Tax=unknown RepID=UPI0003D05625
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor
scnpilot_solids2_trim150_scaffold_5_curated_86
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95263..95787)
DNA (525bp) protein (175aa)
HAD family hydrolase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3JJ96_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG68649.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
HAD family hydrolase
scnpilot_solids2_trim150_scaffold_5_curated_87
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95807..96646)
DNA (840bp) protein (280aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQ49_9RHIZ
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KFG68651.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
binding-protein-dependent transport systems inner membrane component
scnpilot_solids2_trim150_scaffold_5_curated_88
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96643..97470)
DNA (828bp) protein (276aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X5A6_OCHA4
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABS16410.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
scnpilot_solids2_trim150_scaffold_5_curated_89
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97530..98681)
DNA (1152bp) protein (384aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X5A5_OCHA4
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EXL04502.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
extracellular solute-binding protein
scnpilot_solids2_trim150_scaffold_5_curated_90
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98738..99913)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EE1BCB
Putative ATP-binding component of ABC transporter {ECO:0000313|EMBL:AHK45772.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
ABC transporter
Displaying items 61-90 of 349 in total

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