ggKbase home page

scnpilot_solids2_trim150_scaffold_41_curated

Search features with annotation key words

Displaying items 91-120 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_41_curated_91
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106968..107387
DNA (420bp) protein (140aa)
UPI0003CDFB9E related cluster n=1 Tax=unknown RepID=UPI0003CDFB9E
Urease-associated protein {ECO:0000313|EMBL:ESW79817.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_92
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(107531..108277)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y3K6_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH88399.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
scnpilot_solids2_trim150_scaffold_41_curated_93
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108551..109063
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PHN6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EZQ16851.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_94
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109101..110267
DNA (1167bp) protein (389aa)
Phage DNA packaging protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MGF2_9RHIZ
ATP-binding protein {ECO:0000313|EMBL:EZQ16850.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
ATP/GTP-binding site domain-containing protein A
scnpilot_solids2_trim150_scaffold_41_curated_95
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110409..111596
DNA (1188bp) protein (396aa)
Phage portal protein, HK97 family protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LPZ1_9RHIZ
Portal protein {ECO:0000313|EMBL:EZQ16849.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
phage portal protein, HK97 family protein
scnpilot_solids2_trim150_scaffold_41_curated_96
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111596..112270
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00035CDCE1
Tax=BJP_IG2158_Rhodobacterales_64_37
scnpilot_solids2_trim150_scaffold_41_curated_97
unknown

Not on your lists

112279..112569
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_41_curated_98
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112632..112958
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030FD767
Uncharacterized protein {ECO:0000313|EMBL:EZQ16848.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_99
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112962..113615
DNA (654bp) protein (218aa)
primosome assembly protein PriA n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000314B236
HK97 family phage prohead protease {ECO:0000313|EMBL:EKF19779.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
phage prohead protease, HK97 family; K06904
scnpilot_solids2_trim150_scaffold_41_curated_100
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113646..114899
DNA (1254bp) protein (418aa)
HK97 family major capsid protein n=1 Tax=Nitratireductor indicus C115 RepID=K2MZJ1_9RHIZ
Capsid protein {ECO:0000313|EMBL:EXL10072.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
HK97 family phage major capsid protein
scnpilot_solids2_trim150_scaffold_41_curated_101
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115139..115708
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031C5834
Uncharacterized protein {ECO:0000313|EMBL:EXL10071.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_102
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115705..116043
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FFC5ED
Head-tail adaptor protein {ECO:0000313|EMBL:EXL10070.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
phage head-tail adaptator
scnpilot_solids2_trim150_scaffold_41_curated_103
unknown

Not on your lists

116040..116234
DNA (195bp) protein (65aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_41_curated_104
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116215..116625
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000304ECE4
Uncharacterized protein {ECO:0000313|EMBL:EXL10069.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_105
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116760..117176
DNA (417bp) protein (139aa)
tail protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030E8217
Tail protein {ECO:0000313|EMBL:EXL10068.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_106
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117173..117508
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036729D2
Uncharacterized protein {ECO:0000313|EMBL:EXL10067.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_107
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117725..118306
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DCFB49
Tail protein {ECO:0000313|EMBL:EZQ16839.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
phage tail protein
scnpilot_solids2_trim150_scaffold_41_curated_108
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118315..118962
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003059CA6
Glycoside hydrolase family 24 {ECO:0000313|EMBL:EXL10064.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_109
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118959..119849
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FC197F
Uncharacterized protein {ECO:0000313|EMBL:EKF40642.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
phage protein
scnpilot_solids2_trim150_scaffold_41_curated_110
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119846..120307
DNA (462bp) protein (154aa)
peptidase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DDFC4A
Uncharacterized protein {ECO:0000313|EMBL:EKF40643.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
NlpC/P60 family phage cell wall peptidase
scnpilot_solids2_trim150_scaffold_41_curated_111
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120311..124150
DNA (3840bp) protein (1280aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000313A69A
Host specificity protein {ECO:0000313|EMBL:EXL10061.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
phage host specificity protein
scnpilot_solids2_trim150_scaffold_41_curated_112
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124192..124398
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MGE3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF19775.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_113
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124733..125401
DNA (669bp) protein (223aa)
transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037C2C12
Putative Two-component transcriptional regulator {ECO:0000313|EMBL:CDX18828.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
two-component system, regulatory protein; K02483 two-component system, OmpR family, response regulator
scnpilot_solids2_trim150_scaffold_41_curated_114
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125416..126783
DNA (1368bp) protein (456aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CF720A related cluster n=1 Tax=unknown RepID=UPI0003CF720A
ATPase domain-containing protein
scnpilot_solids2_trim150_scaffold_41_curated_115
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126881..127324
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y344_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13838.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_41_curated_116
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127416..128537
DNA (1122bp) protein (374aa)
Cytochrome c-type biogenesis protein CcmI n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRE6_MESAW
cytochrome c-type biogenesis protein CcmI
Cytochrome c-type biogenesis protein CcmI {ECO:0000313|EMBL:AGB47250.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_41_curated_117
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128542..128976
DNA (435bp) protein (145aa)
cytochrome C biogenesis protein CcdA n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D453E
cytochrome c-type biogenesis protein CcmE
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_41_curated_118
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128984..130972
DNA (1989bp) protein (663aa)
Cytochrome c-type synthesis protein cycK n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I0H7_9RHIZ
Cytochrome c-type synthesis protein cycK {ECO:0000313|EMBL:EHK53523.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
cytochrome C biosynthesis protein CycK; K02198 cytochrome c-type biogenesis protein CcmF
scnpilot_solids2_trim150_scaffold_41_curated_119
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130969..131439
DNA (471bp) protein (157aa)
Uncharacterized protein involved in biosynthesis of c-type cytochromes n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KP88_MESAW
uncharacterized protein involved in biosynthesis of c-type cytochromes
Uncharacterized protein involved in biosynthesis of c-type cytochromes {ECO:0000313|EMBL:AGB47247.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
scnpilot_solids2_trim150_scaffold_41_curated_120
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

131563..133122
DNA (1560bp) protein (520aa)
Putative serine protease do-like {ECO:0000313|EMBL:CCV12599.1}; EC=3.4.21.- {ECO:0000313|EMBL:CCV12599.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Serine endoprotease, periplasmic n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EN34_9RHIZ
protease Do
Displaying items 91-120 of 158 in total

View Taxonomy