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scnpilot_solids2_trim150_scaffold_71_curated_119

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 126304..127017

Top 3 Functional Annotations

Value Algorithm Source
LpsC {ECO:0000313|EMBL:CDH85504.1}; EC=2.-.-.- {ECO:0000313|EMBL:CDH85504.1};; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 231.0
  • Bit_score: 264
  • Evalue 1.60e-67
lipopolysaccharide biosynthesis protein n=1 Tax=Rhizobium meliloti RepID=UPI0003661364 similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 231.0
  • Bit_score: 267
  • Evalue 1.30e-68
lpsC; LpsC similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 231.0
  • Bit_score: 264
  • Evalue 3.50e-68

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGGTGGATTCGGGCTCCAGCGATGCCACGCTGCAAATCGTCGAAAAGCTTCAAATGGAAGGCTTCCCCCTTCGGTTCATCTACGAGCCATGGCGGGGATATGGCGGTCAAAAGCAATTCGCGCTGGAACAATGTTCCCAGGAATGGTGCCTCAGCATCGATTCCGATGAACGGTTGAGCCCCAATCTCATCGATGCGCTGCCGGACCTCATTTCGCAACATGAGGTCGCCGGGTGGAAGATCACCAGATACGACTATCTCACGGGCTTTGGTTTCGTGCCGCCACGCGCGCACGAACGCTTTCACCTGAGGCTTTTCCGGCGCGGACTTGGAGCTTTCAACCCCGAAGATCGCATCCATGAGGGCATCACGGTGAAAGGCCGCGTCGAAAAGGCGAGGCAGGGCGGACTGATGCACTTTCGCCCCCTTCCCCTTGCCGAACAGATGCTCAAAGAGAACAATTACTCGTCGCTCAAGGCGACCATGAAGGCCGAGAGAGGGTTGCCCGCGCGGCCGTTCAAGATGATCGTGAGCCCGCCGATATTCTTTCTGCGCTGGTATTTTCGATACGGCCTTTGGAGATGCGGCTGGTCAGGGTTCATCCGCGCGGCGAACGGCGCGGTATATTCCTATCTGACCGAAGCCAAGCGTTACGAATTCGAGGCCTTGCGGAAAGTACCCCCGGTAGAACCCGGATATCCTCCGGACTATTAG
PROTEIN sequence
Length: 238
VVDSGSSDATLQIVEKLQMEGFPLRFIYEPWRGYGGQKQFALEQCSQEWCLSIDSDERLSPNLIDALPDLISQHEVAGWKITRYDYLTGFGFVPPRAHERFHLRLFRRGLGAFNPEDRIHEGITVKGRVEKARQGGLMHFRPLPLAEQMLKENNYSSLKATMKAERGLPARPFKMIVSPPIFFLRWYFRYGLWRCGWSGFIRAANGAVYSYLTEAKRYEFEALRKVPPVEPGYPPDY*