ggKbase home page

scnpilot_solids2_trim150_scaffold_1753_curated_6

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(5490..6110)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome b561 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I1H0_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 212.0
  • Bit_score: 220
  • Evalue 1.20e-54
cytochrome b561 similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 212.0
  • Bit_score: 220
  • Evalue 3.90e-55
Cytochrome b561 {ECO:0000313|EMBL:ADP71261.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 212.0
  • Bit_score: 220
  • Evalue 1.70e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGCACGCTCGGGCTGCATCCGAAATAAAGGTCTGGGACCCGTTTGTTAGAGTAGCTCACTGGGCCGTTGCCCTTGCATTCTTCGTCGCATACCTGGCGGAAGACGTCATGACGGTTCACGTCTGGGCGGGCTATATCGTCGGCGTTCTTGTCCTGGCCCGCATCGGCTGGGGATTTGTCGGGCCGCGTCATGCGCGGTTTACTGACTTCGTGACCGATCCGATAGCTGCCATCCGTTATCTCTGGGATCTCATGCTTGCCCGAGCGAAGCGCTACATCGGCCATAGTCCCGCAGGTGGCGCCATGGTCATAGCACTGTTGATTTTCCTGGCTGCAACCGTGGTCACCGGGCTCATCCGATATGCCGAAGAAGGCGCTGGGCCGTTGGCCCCACTATATGCACAGACCTCTACTACAATGACAGAACAACTCCCCACGGGCGAAGAGGACGAGGGTGGCAAGACCAGAGGCGAGAGCGCCTTTGGTGAGGCCCATGAAGTGATCGCCAATATCACGCTGGGCTTGGTCATTTTTCACATTCTCGGTGTCCTGCTAGCAAGCTTTGTGCATCACGAGAACCTTCCGAGAGCTATGGTCACTGGACGCAAACGATCCAACTAA
PROTEIN sequence
Length: 207
MHARAASEIKVWDPFVRVAHWAVALAFFVAYLAEDVMTVHVWAGYIVGVLVLARIGWGFVGPRHARFTDFVTDPIAAIRYLWDLMLARAKRYIGHSPAGGAMVIALLIFLAATVVTGLIRYAEEGAGPLAPLYAQTSTTMTEQLPTGEEDEGGKTRGESAFGEAHEVIANITLGLVIFHILGVLLASFVHHENLPRAMVTGRKRSN*