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scnpilot_solids2_trim150_scaffold_5_curated_50

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 53863..54570

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhizobium loti RepID=UPI0003809D30 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 237.0
  • Bit_score: 298
  • Evalue 6.90e-78
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 237.0
  • Bit_score: 298
  • Evalue 9.70e-78
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 222.0
  • Bit_score: 291
  • Evalue 2.00e-76

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGGCAAAGATAGCAAGCGCGGCATCGGCGGGCATGGCCCAGCGTGCGGACATGGCGCTGGTGGAACGCGCGAGGGCACGCGAGGCAGGCGCCTGCCGCCTGCTCATCAAGACCTACAACCAGAGGCTCTACCGGCTCGCCCGCAGCATCGTGCGCAATGACGGCGAGGCGGAGGACGTGCTGCAGGAGGCCTATATGCGGGCCTTCACGCATCTGGACGGGTTCCGCGGCGATTCCGCGCTGGCGACGTGGCTTTCACGCATCGTCATCAACGAAGCGCTCGGGCGGATGCGCAAGCGGCGCAGGACGGCAGCTGTCGAAGCCCCCGAAGCCTATGGCGAGAACCGCCATGGCGGGGCGAGCATCATCCCCTTTCCTCTCGGCTCGAGCGAGGCCGACCCGGAGCGTACGATGGCACAAAGGCAGATTCTTCACCTGGTCGAACGGGCAACGGACGATCTGCCCGACATCTATCGCACCGTCTTCGTCGCCCGCGTGATCGAGGGGTTGAGCATGGAGGAGACGGCTGAACTCCTCGACATCAAGGCGGAAACGGTGAAGACAAGACTCTTCCGGGCGCGCCGTCTCGTGCGCGAGCAGATAGAGAAGGAAGTCGGCCCGGTGCTGATGGATGCCTTCCCCTTCGCCGGCCGCCGCTGCGAGCGGGTGACGAAAGCCGTCATGCTGCGCCTCGGCCTCGCGGAATAA
PROTEIN sequence
Length: 236
MAKIASAASAGMAQRADMALVERARAREAGACRLLIKTYNQRLYRLARSIVRNDGEAEDVLQEAYMRAFTHLDGFRGDSALATWLSRIVINEALGRMRKRRRTAAVEAPEAYGENRHGGASIIPFPLGSSEADPERTMAQRQILHLVERATDDLPDIYRTVFVARVIEGLSMEETAELLDIKAETVKTRLFRARRLVREQIEKEVGPVLMDAFPFAGRRCERVTKAVMLRLGLAE*