ggKbase home page

scnpilot_solids2_trim150_scaffold_181_curated_23

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 25492..25785

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF843A related cluster n=1 Tax=unknown RepID=UPI0003CF843A similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 79.0
  • Bit_score: 102
  • Evalue 3.00e-19
DNA-binding protein {ECO:0000313|EMBL:ESY69605.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 79.0
  • Bit_score: 102
  • Evalue 4.30e-19
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 74.0
  • Bit_score: 100
  • Evalue 3.60e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC232B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGTCGTCAGTACAAAAAGTATCGATCTGCCAGGTGAAGGCGGCCAGGGCCCTGTTGGCGTGGTCGCAAGCCGATCTCGTCCGGCATTCCGGAGTGTTGGAGCCGACCGTCAAGCGGCTGGAATCCCGGGATGGTGCGCTGGGCGGTAGAACCGGGACGGCGCAGAAGATTGTCGGTGCTTTCGAGGCAGCCGGCATTCGGTTCATTTCCGAGAACGGGGAAGGTACGGGCGTCCGGCTTCACGATCTCCGGGCGGAATTCGAACCTTCCCGCATTGCAAAGGCCGTCAAATGA
PROTEIN sequence
Length: 98
MSSVQKVSICQVKAARALLAWSQADLVRHSGVLEPTVKRLESRDGALGGRTGTAQKIVGAFEAAGIRFISENGEGTGVRLHDLRAEFEPSRIAKAVK*