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scnpilot_solids2_trim150_scaffold_181_curated_48

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 53655..54518

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00036C928F similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 237.0
  • Bit_score: 232
  • Evalue 5.70e-58
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 267.0
  • Bit_score: 230
  • Evalue 6.80e-58
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADH90786.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 267.0
  • Bit_score: 230
  • Evalue 3.00e-57

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Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGCGGGCAGATTCCAAGGTTGGCATGGCGATGGCCCGATGAACACTGCGGATTCGCTCGCGCAGGCACAAAACGTGATCCGCATGATCGTGGCCGCTCGATACGATCGCCCTTCGCTGGTGGCACAGATCGCCTGCGAGATCGGCGCCGAAATCGTCGAGGCCATCATCCCGCCCGGCCATGACCTGAATACGGTCGATCTGGCTCGGCGTTACCACACCAGCAGAACGCCCGTCCGGGAAGCCCTTATTCTGCTCGAGAACGAAGGCCTGGTAGATATAGAGCCACGCAAGCGGCCGCGCGCCCACATCCACACCATAACCGAAGTGCGCGAGATATACCGTACACGCACGGTTTTGTTCGAACTCATGGCCACCGACACGGCCGTTCTCGTCACGGCCGAGGACATCGAATTTCTCCGCTCAATCGTGACGCGCATGGCACACGCCTCGGCGCTGAATGACGCCAACGCCTTCGCGTGGCTGAGCGTCGAGTTCCATGACCAGGACACCCGGCTTTCGCGGAATGTGACCGCGAAACGGATTCATGATTCTCTCTTGTTGCGCACGCTGGCCATTCGGCGGCTCAGCCTGTCGCAGCCCGACAGGCTGGAACGGTCGCTGGAGAACCACGTGCAACTCGTCAGCGCCTACGCCGCACGTGACTCGCATCTTGCCGGCGCGATCCTGCGCGCCAACCATACCGGCGCGCTGGCCGCGGTGGAGAAGTTCTTCCGGGACACCGGCACGCTCACCCGGCACATTGCCGCAGACACGCAGGAGGGAAGGACGCCGCGCAGAAAAGCAGGAGTCATTTCCGAACCCGGGGAAAAGGAACCTGTCTGTGCCCCTAAACTATCTTGA
PROTEIN sequence
Length: 288
MAGRFQGWHGDGPMNTADSLAQAQNVIRMIVAARYDRPSLVAQIACEIGAEIVEAIIPPGHDLNTVDLARRYHTSRTPVREALILLENEGLVDIEPRKRPRAHIHTITEVREIYRTRTVLFELMATDTAVLVTAEDIEFLRSIVTRMAHASALNDANAFAWLSVEFHDQDTRLSRNVTAKRIHDSLLLRTLAIRRLSLSQPDRLERSLENHVQLVSAYAARDSHLAGAILRANHTGALAAVEKFFRDTGTLTRHIAADTQEGRTPRRKAGVISEPGEKEPVCAPKLS*