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scnpilot_solids2_trim150_scaffold_157_curated_70

Organism: solids_Rhizobiales_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(49762..50946)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Agrobacterium sp. ATCC 31749 RepID=F5JER1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 401.0
  • Bit_score: 345
  • Evalue 6.40e-92
Uncharacterized protein {ECO:0000313|EMBL:KDR88274.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 401.0
  • Bit_score: 359
  • Evalue 4.60e-96
cp4-like integrase similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 403.0
  • Bit_score: 331
  • Evalue 5.10e-88

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGCCTCTCTCTGATGTCGTGTGCCGCAACACGCGGCCGGCCGAAAAAGCGAAAAAGCTTGTCGACGGTAAGGGGCTCTACCTCTATGTCGCACCGAGCGGCGGCAAATTGTGGCGTTGCGACTATGCGTTTGCGGGCAAACGGCGCACGGCCAGCTTCGGCAAATATCCCGCAGTCAGCCTGGCTCAGGCGCGGGGAAAGCGGGATGATCTGAAGCAGGCAATCGCCGAAGGGCGCGATCCGGCAACACCCGAGAGCCGCGGCGCAACTTTCGAAGAACTGGCGCGCGAATGGTTTAAGGCCAATGAAACGAAGTGGGAAACCAGCTACTCGGATCGCATCTGGCGCCGCGTCGAACGCGAAGTGTTCCCAACGCTCGGGCCGAAAGGAGTGGCCGAGATCGAGCCGCGAGAAATCCTCGCCGTGTTGCGGTCGGTCGAGAACCGCGAGGCCATCTACTCGGCTCGCCGCATTCACCAGATGGTCAGTCAAGTTTTCAAGTACGCGATCGTCAGCGGGCACTTGAAGCACAATCCTGCTGCGGATCTAAACGTCGCTTTGAAGGCTGTGCCGAAGGCGAAAGGGCGTGCTGCTCTGACAGCCGCCGATCTCCCCGAGTTCTTCAAGAAGCTTCGCGCAACGCCGATGGAGGAGTCGACGCGCTTCGGGCTCCTGGCGGTCGCGCACGCCTTCGTCCGCACCAACGAAATCCGATTCGCCAAGTGGGGAGAATTCGACTTCGAGCGCGCAATATGGACGATCCCCGCGCCGCGAATGAAGATGAAGCGGGAACTTCGGGTGCCTCTCAGCCGGCAGGCGGCTGCCATCTTCCTTCGACTTCGCGAACTGGCAGGCAGCAGCGAGTGGGTGCTGCCAGGCGTACACGGTAGGCCGGTGAGCGAGAACTGTTTGATCTATGCGCTCTACCGCGTGGGCTACCACAGCCGGGCGACCGTCCACGGGTTTCGGGCAACGGCATCGACGATCCTGAACGAATCGGAATTGTTCGACCCACTGGCGATCGAACACCAGCTTGCCCACGCTCCGAATGATGCGATCCGGGCTGCCTACGACCGCGGCGAGCGGTGGGACAGCCGCGTGAAGATGATGCAGTGGTACTCCGACCTGCTCGAAGGCTACGAGCGGGATGCGGTGAGGAACGATTTCGCGGATTTGCTGGAGTGA
PROTEIN sequence
Length: 395
MPLSDVVCRNTRPAEKAKKLVDGKGLYLYVAPSGGKLWRCDYAFAGKRRTASFGKYPAVSLAQARGKRDDLKQAIAEGRDPATPESRGATFEELAREWFKANETKWETSYSDRIWRRVEREVFPTLGPKGVAEIEPREILAVLRSVENREAIYSARRIHQMVSQVFKYAIVSGHLKHNPAADLNVALKAVPKAKGRAALTAADLPEFFKKLRATPMEESTRFGLLAVAHAFVRTNEIRFAKWGEFDFERAIWTIPAPRMKMKRELRVPLSRQAAAIFLRLRELAGSSEWVLPGVHGRPVSENCLIYALYRVGYHSRATVHGFRATASTILNESELFDPLAIEHQLAHAPNDAIRAAYDRGERWDSRVKMMQWYSDLLEGYERDAVRNDFADLLE*