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scnpilot_solids2_trim150_scaffold_791_curated_23

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(20584..21231)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NI79_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 197.0
  • Bit_score: 275
  • Evalue 3.40e-71
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS28746.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 197.0
  • Bit_score: 275
  • Evalue 4.70e-71
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 189.0
  • Bit_score: 269
  • Evalue 7.60e-70

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGCGGAGCCGGGCCCTCGCGCTTGACGTTTCGGCCCGGGCAGAGAACTCTCTGGCGACCACCGGAGAAACTGCCACCATGTCAAGCGCGGCAGCGAGCGACGACGAGGCCCTGATCCGCCGCATCGCCGCGGGCGACAAGCTCGCCATGCAGGTGCTGTTCGGCCGCTACCAGGTGAGGATTTTCCGCTTCCTGTTGCGCTTCGTGAAGGACGAGGCCGAGGCGGAGGACCTGATCAGCGAGGTGTTCCTGGACGTATGGCGCCAGGCCGGGCGCTTCGAGGCGCGCTCCAGCGTCTCGACATGGCTACTCGGCATCGCCCGTTTCAAGGCGCTGTCACTGGTGCGCAAGCGCCGCGACGACAGCCTCGACGAAGAGCACGCCGCCGGCATCGCCGACACGGACGACACGCCTGAGGTCGCGCTGCAGAAAAAGGACAAGGGTTCGGTGCTCCGGCAATGCTTGCACAAGCTGTCGGCGGACCACCGGGAGATCATCGATCTCGTCTACTACCACGAGAAATCCGTGGAGGAGGTGGCTGAGATCCTCGGCATCCCGGGCAATACCGTCAAGACGCGCATGTTCTACGCGCGCCAGAAACTCTCCGAGATTCTTCGACACGCCGGTGTCGACAGGGGTTGGCCATGA
PROTEIN sequence
Length: 216
MRSRALALDVSARAENSLATTGETATMSSAAASDDEALIRRIAAGDKLAMQVLFGRYQVRIFRFLLRFVKDEAEAEDLISEVFLDVWRQAGRFEARSSVSTWLLGIARFKALSLVRKRRDDSLDEEHAAGIADTDDTPEVALQKKDKGSVLRQCLHKLSADHREIIDLVYYHEKSVEEVAEILGIPGNTVKTRMFYARQKLSEILRHAGVDRGWP*