ggKbase home page

scnpilot_solids2_trim150_scaffold_4007_curated_2

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(751..1659)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037AF3D4 similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 290.0
  • Bit_score: 190
  • Evalue 2.00e-45
LysR substrate-binding domain protein {ECO:0000313|EMBL:KCV62365.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 307.0
  • Bit_score: 194
  • Evalue 1.90e-46
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 289.0
  • Bit_score: 190
  • Evalue 8.20e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCCATTGACCTTCCGCCAACTCGAAGTGGTGCGTGCCGTGAGCCGTCAGGGCTCGGTGACGGCAGCGGCTGGCGCGCTGGCGATCTCGCAGCCGGCGGTCAGCATGATGCTGCGCGAATGCGCGCGCGCCGCCGGCTTTCCGCTGTTCCAGCGCCGCCAGGGCCGCTTGCAGCCGACGCCCGAGACGCGCGCGCTGCTCGGCGACCTCGAGCGCGTCTTCGACGGCGTCGAGCGCCTCAACCGGCTCGTCGATGACATCCGCGACACCAGCATCGGCACCTTGCGCATCGCCGCGACGCCGACGCTCGCCGACAACATCCTCCCCATCGCCGTGCAGGCTTTCTGCGCCGCGCGCCCGCGCATCCATATCGCCATCCAGTCGATGGACAATCTCGGCGTCATCGACACGCTGGCGCGCGAACGGGTCGATTTCGGGCTCGTGCTGACGCCGATCAGCCAGCCCGACGCGCGCCTGCTCGAACTGTGCCGCGCCGACCTGATCTGCATCGTGGGCGAGAGCCATCCGCTCGCCGCCCGCGACCAGGTCAGCGCCGCCGAGATCGCGGCCTTCCCTCTGGTGTCCTTCGCCCGCAGCCTGCCGCTCGGCAACCTCGTCGATGACTGGTTCCGCGCGGCGAACGTGCCGCGCCGCATCGCCATCGAGGTCAACCAGTCCTCGCTCGCCTGCGCGCTGGTGCGGGCCGGCGCCGGCGTCGCGGTCGTCGATCCGTTCTGGCTGCTGGAGGAGCGCCGTCACGGGCTGGTGCGGCTGCCGATCGCCGATCCGGTCTCGGTCGGAGCCCAGGCGCTGATCCCGCGCGAGGCGCCGCTATCGCGTCCGGCGCGCCTGTTCCTCGCCACGCTGCGCCGCACCGCGACGAACCTGCTTGGCCAGGCGGCGTTCTGA
PROTEIN sequence
Length: 303
MPLTFRQLEVVRAVSRQGSVTAAAGALAISQPAVSMMLRECARAAGFPLFQRRQGRLQPTPETRALLGDLERVFDGVERLNRLVDDIRDTSIGTLRIAATPTLADNILPIAVQAFCAARPRIHIAIQSMDNLGVIDTLARERVDFGLVLTPISQPDARLLELCRADLICIVGESHPLAARDQVSAAEIAAFPLVSFARSLPLGNLVDDWFRAANVPRRIAIEVNQSSLACALVRAGAGVAVVDPFWLLEERRHGLVRLPIADPVSVGAQALIPREAPLSRPARLFLATLRRTATNLLGQAAF*