ggKbase home page

scnpilot_solids2_trim150_scaffold_454_curated_9

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(10443..11636)

Top 3 Functional Annotations

Value Algorithm Source
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXP reductoisomerase) (EC:1.1.1.267) similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 388.0
  • Bit_score: 435
  • Evalue 1.90e-119
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystac similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 388.0
  • Bit_score: 435
  • Evalue 8.60e-119
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QIR8_METSZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 388.0
  • Bit_score: 435
  • Evalue 6.10e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methylocystis sp. SC2 → Methylocystis → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGATACAGCAGCGTAAACGCCGATTGGCCATCCTCGGCGCGACAGGGTCGGTCGGCCGTAGCACGCTCGCGGTGGTGGCGGCGAACCCGGATCGGTTCGAGATCGATGCCGTGGCGGCCGGCCGCGATGCCGCTGGCCTGGCGGTGGCGGCGCGCCGCGTCGGCGCCCGTTTCGCGGCGCTCGCCGACCCGTCGCAATATGCGGCGCTCAAGGCGGAACTCTCGGGCAGCGGCATCGAGGCGGCGGCCGGGGAGGACGCGGTTATTGCCGCAGCGACCGGCGAATCCGAGCTTGTCGTCGCGGCGATCAGCGGCGTCGCCGGCCTGCGCTCGACCTTCGCCGCCGTGCAGCGCGGCGTCAGCGTGGCGATCGCCAACAAGGAATCGCTGGTGTGCGCCGGCACGGCCCTGATGCGTTCGGCCGCCGCGGCCGGCACCGTGATCCTGCCGATGGATTCCGAGCATAACGCCTTGTTCCAGGCGCTCGGCGACACGCCGCGCGAGCGCATCGCCGAGTTGATCCTGACCGCGTCCGGCGGCCCGTTCCGGAGCTGGAGCGCCGAGCGCATCGCGCTCGCGACGCCGGAGCAGGCGCTGGCCCATCCCAACTGGTCGATGGGGGCGAAAGTCACCATCGATTCCGCCAGCCTGATGAACAAGGGCCTCGAACTGATCGAGGCGCATCACCTGTTCGGCGTGCCGGCCGAACAGCTCGGCGTGCTGGTGCATCCGCAGTCGATCGTGCACGGACTGGTGCGGTTTCGCGACGGGGCGCTGCTGGCCGGGCTCGCGCCGCACGACATGTGCGTGCCGATCGCTCATTGCCTCGGCTTTCCCGACCGGATCGCCTCGGGGGCCGCGACGCTCGATCTCGCGGCCATCGCCACGCTGCAGTTCGAGCAGCCGGACCTTGGCCGCTTTCCGGCGCTGGCGCTCGCCACGAGCGTGTTGCGCGCCGGCGGCGCGGCGCCGACGGTCCTCAACGCCGCCAATGAGGTGGCGGTGGCGGCTTTCCTCGCCGGCCGGATCGGCTTCGGTCATATTCCCGCCGTGGTCGAGGCCACTCTCGAGAAGGCGGTCGGCCGGATTTCCATGGCCGAGCCGGATGGCATCGAGGAGGCGCTGGCTGTTGACCATATTTCGAGAAAGCTCGCCGCTGACGCCGCCGAGGAGAGGCTGTCGCTTGCGCGCTGA
PROTEIN sequence
Length: 398
MIQQRKRRLAILGATGSVGRSTLAVVAANPDRFEIDAVAAGRDAAGLAVAARRVGARFAALADPSQYAALKAELSGSGIEAAAGEDAVIAAATGESELVVAAISGVAGLRSTFAAVQRGVSVAIANKESLVCAGTALMRSAAAAGTVILPMDSEHNALFQALGDTPRERIAELILTASGGPFRSWSAERIALATPEQALAHPNWSMGAKVTIDSASLMNKGLELIEAHHLFGVPAEQLGVLVHPQSIVHGLVRFRDGALLAGLAPHDMCVPIAHCLGFPDRIASGAATLDLAAIATLQFEQPDLGRFPALALATSVLRAGGAAPTVLNAANEVAVAAFLAGRIGFGHIPAVVEATLEKAVGRISMAEPDGIEEALAVDHISRKLAADAAEERLSLAR*