ggKbase home page

scnpilot_solids2_trim150_scaffold_455_curated_5

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 4171..5277

Top 3 Functional Annotations

Value Algorithm Source
extensin n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003685BB2 similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 310.0
  • Bit_score: 253
  • Evalue 2.30e-64
Extensin {ECO:0000313|EMBL:KFG71089.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 347.0
  • Bit_score: 246
  • Evalue 5.30e-62
extensin family protein similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 331.0
  • Bit_score: 239
  • Evalue 1.40e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGCAATCGCTTCTGCGTCCACTCATCCTGATCGGCTGCGCCACCATTCTGCTGGCGGGCTGCGGCCGCTTCACCAATCAGCAGCGCGAGCCGTGGCGCCGCCAGGCCGAGCTCGCCTGCATGCGCTCAAAGGCGATCAATCCCGGCGACTACATCAAGAAATCGCCGCCGATCGGCAATAGCTGGAGCTGCGGCGCCGATTTCCCGCTCAAGGTCTCGGCCTTCGCCAATGAGACCACCGCCAGCATTCCCGGCCAGAATGGCGGGCTGATGACCGATATCACGCCAGCCGCGACGCTGGTGTGCCCGATGGTGGCGGCGATGGATCGCTGGATCGCCGAGGTCATCCAGCCGGCGGCGATGGCGCGCTTCGGCCAGCCGGTGACGCTGATCAAGACGATGGGCTCGTATAATTGCCGCCCGCGCAACAACCAGAGCGGCGCCAAGCTTTCCGAGCACGGCTTCGCCAATGCGGTCGATGTGGCGGGTTTCGTGCTCGCCGACGGCAAGACGATCACCGTGGTGAGGGACTGGACGCGCGGCGCGCCGCAGGAGCAGGCCTTCCTGCGCCAGGTGCAGATCGGCGCGTGCCAGGTGTTCACCACCGTGCTGGCGCCGGGCTCGAACGCCTTCCATTACAACCACATCCATCTCGATCTGGCGCGCCATGGCGCGAAGGGCAACCGGCATTATTGCCGCCCGATCATCGACCCGGCGAGCCTGACGCCGGTGCCGTCATTGTTCGATGCCGTGCCGCGTCCCGGCCCGGAATCGCAGACGTCGCAGTACGTGCCGGCGCTGCCGCAGCAGCGCACCGTGGCGGGCTCGTATCTCGGCCGCCCCGGCGAAAGCCCGGCCGCGCCGGTCTATAACCGGGCGACGCCGGTCGGCGGGCCCTATGCCAGGCTCAGTGGTGGGGAAGGCTATAATCCGGATTACCGGCCAGCGCGGCCGGTCGGGCAGCCACTGGCGGTCGGCGTCAGGCCGCAGCCTGAGGCCAGCGCGCCCGATGACAGTTTCGAGGGCAATGACGACGAGAATATCGACGTGCACCAGTTCGACCTGCCCGATGACGGGGCCGAGGTGACGGGCCAGATCCGGCGCTAG
PROTEIN sequence
Length: 369
MQSLLRPLILIGCATILLAGCGRFTNQQREPWRRQAELACMRSKAINPGDYIKKSPPIGNSWSCGADFPLKVSAFANETTASIPGQNGGLMTDITPAATLVCPMVAAMDRWIAEVIQPAAMARFGQPVTLIKTMGSYNCRPRNNQSGAKLSEHGFANAVDVAGFVLADGKTITVVRDWTRGAPQEQAFLRQVQIGACQVFTTVLAPGSNAFHYNHIHLDLARHGAKGNRHYCRPIIDPASLTPVPSLFDAVPRPGPESQTSQYVPALPQQRTVAGSYLGRPGESPAAPVYNRATPVGGPYARLSGGEGYNPDYRPARPVGQPLAVGVRPQPEASAPDDSFEGNDDENIDVHQFDLPDDGAEVTGQIRR*