ggKbase home page

scnpilot_solids2_trim150_scaffold_751_curated_3

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: 2660..4213

Top 3 Functional Annotations

Value Algorithm Source
HlyD family secretion protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89JI1_BRADU similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 481.0
  • Bit_score: 470
  • Evalue 2.90e-129
HlyD family secretion protein; K02005 HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 481.0
  • Bit_score: 470
  • Evalue 9.20e-130
Putative macrolide-specific efflux protein {ECO:0000313|EMBL:KGJ70864.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 481.0
  • Bit_score: 470
  • Evalue 4.10e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
ATGCCAAGCCGGCGCCGGGCGTGCAAGGATGCAGGGTCGGCCGGGTATGTGGCGCAGTTTCCACCAGTGAAATGCCAGAGATTCGTGTCCGGCGCCCCGAACCACCTGCGGTGCCACGCGATGAAACGGCTTCTTTCCCTCGGTTTGATCAGTGGCGCGATTTTGGGCATGATCGCGTATGCGGCGGTGCCGCCCGCCAGCCGGGACGACCTCACCGGCGCGCTGCCCGGCATCGGGCAGAAACTCTCGCAAAGCTACCAGGCCATTACCGAAGCCAGGGCGTCGGCCCCCGCCGATGCCGCGCATTTCCTGACCGCGACGATCCAGCGCGGTCCGCTGGAGCAGGTCGTCACGGTGACGGGCAGCCTGAGGCCGGTCGAGACGGTGGAGGTCGGCTCGCAGCTCGCCGGCCAGATCGACAGGCTCCTGGTCGATTTCAACGACAAGGTCCGGCAGGGCGATCCGCTGGCGATCATCGACCAGCGCAGCTACATCACCAAGGTGGCCGGCGCCCGCTCGTCGCTCGACATGGCGCGGGCCGAGGTCCGCATCGTGCAGGCCAAGCTCGACAAGGCGAAGATCGACCTGGAGAACGCCAAGGCCAGCCGGGCGGTGCTCGTCGCCAGGCTCGACAGCGCCAAGGCGCAGAAGACTGCCGCCGAGCGCAATCTCGACCGCAAGCTGGCGTTGAAGCAGCATAATGTCGCCTCGGTGACGACAGTCGAGGAGGCGCAGACCAACCTTGCCTCCGCGTCGGCGCTCGCCCGCGAGCAGAACACCGTCATCGATCTCAACGTCTACACGGTCGATGCGGCGGAGGCGGAGGTGCGGCGGCTGGATGCGGAACTGGCCCAGGTCCGGGCGGCGGTGCCGCTGCGGGAATCGGAACTGCACATCGCCGAGATCGATCTCGACCGCACCACGATCCGCTCGCCGATCGATGGCGTCATTGTCGGCCGCTTCGTCAACCAGGGCCAGACGCTCGCCTCCGGGCTCGAGGCGCGCACCGCCTTCACGGTGGCGCGCAATCTCGAGGAGATGGAGGTGCATGCGCTGGTCGACGAGACCGATATCGGCCGCATCAAGGCCGGCCAGCGCGCGACCTTCACGGTCGATGCCTTCCCGAGCCGGCGCTTTGACGCCGTGGTGCGCCAGGTGCGCAAGGCGGCGCAGATGAACCAGAACGTGGTGACCTATACCGTGGTGCTGACCACGGACAACCGGGACGGCGTGCTGCTGCCGGGCATGACGGCGCTGGTCAAGCTGATCGTGCATCGCGACGAGGACGTGCTGAAGGTGCCGCTGGCGGCGCTGCGCTTCACGCCCACCGACCCGTCGGCGCGCGAAACCGTCGCCAACCTGCCGAAGGGGCAGGCGGTCTGGGTGCGCGGCCCGGATGGGCGGATCGCGCCGGTGACCATCACGACCGGGGCCTCGAGCGCCGATCAGGTCGCGCTCAAGGGCGGCTCGCTCGCCGAGGGCGACGTGGTCGTGGTCGGCCAGGCGAGCGATCCCGTGTCGCGCCGGCTGTTCGGCATCAGGATCGGGTTGTGA
PROTEIN sequence
Length: 518
MPSRRRACKDAGSAGYVAQFPPVKCQRFVSGAPNHLRCHAMKRLLSLGLISGAILGMIAYAAVPPASRDDLTGALPGIGQKLSQSYQAITEARASAPADAAHFLTATIQRGPLEQVVTVTGSLRPVETVEVGSQLAGQIDRLLVDFNDKVRQGDPLAIIDQRSYITKVAGARSSLDMARAEVRIVQAKLDKAKIDLENAKASRAVLVARLDSAKAQKTAAERNLDRKLALKQHNVASVTTVEEAQTNLASASALAREQNTVIDLNVYTVDAAEAEVRRLDAELAQVRAAVPLRESELHIAEIDLDRTTIRSPIDGVIVGRFVNQGQTLASGLEARTAFTVARNLEEMEVHALVDETDIGRIKAGQRATFTVDAFPSRRFDAVVRQVRKAAQMNQNVVTYTVVLTTDNRDGVLLPGMTALVKLIVHRDEDVLKVPLAALRFTPTDPSARETVANLPKGQAVWVRGPDGRIAPVTITTGASSADQVALKGGSLAEGDVVVVGQASDPVSRRLFGIRIGL*