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scnpilot_solids2_trim150_scaffold_3603_curated_3

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(1341..4850)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 999.99
  • Bit_score: 1631
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 999.99
  • Bit_score: 1540
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D4ADB3 similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 999.99
  • Bit_score: 1675
  • Evalue 0.0

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3510
ATGACCGAATTTCGCAAGGTTCTGGACGCGGCGACGCCGGTGACCATTGGTGGCGTGCCCGACGGCGCCGAAGCCTTCGTGCTGGCCGATATCGCCGGCGCGGCCTTTGCCGCCGGCGCCGACCTGCCGGCGCTCGCCGTCTATGTCGCGCGCGACGGGCAGCGCCAGCAACTGATCGAGCAGGCGCTCGATTTCGCCGCGCCCGAGATCGAGGTCCTCAGCCTGCCGGCCTGGGATTGCCAGCCCTACGACCGCACCTCGCCCAATGCCGTGGTGATCGCGCGCCGCATGGCGACGCTGTCGCGGCTGGTGCGCTCGCGCGGTGGCGAGCGGCCGCGCGTCGTCGTCACCACGGTCAACGCCATCCTGCAACGCGTGCCGCCGGTCGCCTGGATCAAGCGCGAGAGCCTGTCCTTCGCGCCCGGCAACGCGCTCGACATGAACGAGATCGCGCGCTGGCTCGACATTAACGGCTTCCAGCGCACCGGTACAGTGCGCGATGCCGGAGAATATGCCGTGCGCGGCGGTATCCTCGATCTGTTCCCGCCCGGCATGGACAACCCGATCCGGCTCGATTTCTTCGGTGACACGCTGGAATCGCTGCGCAGCTTCAACCCCGAGACGCAGCGCACCATTGGCCAGTTGCACGCGCTCGAACTGCTGCCGATGGCCGAGTTCCAGATGACCACCGAGGCGATCAAGCGCTTCCGCACCGGCTACACCGCGACTTTCGGCGCGCCCGGCCGCGACGACGCGCTGTTCGAGGCGATCAGCGAGGGCCGGCGCTTTCCCGGCATGGAACACTGGCTGCCGCTGTTCCACGGCGGCCTCGATTCGCTGCTCGATTTCACGCCGGGTGCGCGCATCGTGCTCGATCCGCTGGCCGGGCAGGCGGCCGAGGAGCGCCTGACGCAAATCGCGGATTATTACGACGCCCGCAAGGCCGCGCTGGAGAACAAGGCGGCCGGCGTGCCGTACAAGCCGCTGCCATGCAAGGAGCTGTATCTGTCGCCGGCCGAATGGCAGGCCGCGAATGGGGCCGCGGGCAGCGTACATCTCAGCGGCTTCATCGCGCCGGAGGTTTCGGGCCGCACCGTCATCCATGTCGAGGGCCGCAAGGGGCACAGCTTCGCCGCCGAGCGCGCGGTCGAGGGCGCGAGCGTGTTCGAGGCGGTGGTCGCCCATGTGCGCGCGCAGCAAAAGGCCGGCCGCAAGGTCGTGCTGGCAAGCTGGACGGCCGGCTCGCGCGAACGGCTTGCCGGCGTGCTCGCCGATCACGGCCTGACGCAGGCCAAGCCGATCCGGGCGCGCCGCGAGGTGGCGGCACTTGCCGGCAATGAGGTCGGGCTGGCGGTGTTCGGGCTCGAAAGCGGCTTCGATCTTGACGATCTCACGGTGATTTCCGAGCAGGATATCCTCGGCGAGCGCCTGTCGCGGCCGAAGCGCGCCCAGAAGCGCGGCAAGGATTTCCTCACCGAGGTCTCGAGCCTGTCGGCCGGCGATCTCGTGGTGCATGTCGAGCACGGCATTGCCCGTTTCGTTGGCCTCAAGACCATCGAGGCTGCTGGCGCGCCGCATGACTGCCTGGAACTGCATTATGCCGGCGGCGACCGGCTGTTCCTGCCTGTCGAGAACATCGAACTGCTCACGCGCTACGGCTCCGAGGATGCCGAAGCCGCCCTCGACAAGCTCGGCGGCGGCGGCTGGCAGGCGCGCAAGGCCCGCCTGAAGAAGCGCATCCGCGAGATGGCGCGCGGCCTGATCAAGATCGCCGCTGCCCGGCTGATGCGCGAGGCGCCGCGCCTCGACGTGCCGGACGGGCTCTATGACGAGTTCGCGGCGCGCTTCCCCTATGACGAGACCGAAGACCAGCAGGGCACCATCGATTCGGTGCTCGACGATCTCGGCTCGGGCCGGCCGATGGACCGGCTCGTGTGCGGCGATGTCGGCTTCGGCAAGACGGAAGTGGCGTTGCGCGCGGCATTTGTCGCCGCCATGGCCGGCAAGCAGGTCGCGGTGGTGGTGCCGACGACGCTGCTGGCGCGCCAGCATTACGCAACCTTCGCCGAGCGCTTCAAGGGCCTGCCGCTCAAGGTGGCGCAGGCTTCGCGCATGGTGTCATCCGCCGATCTCAAGCTCGCCAAGGCGGGGCTCGCCGACGGCTCGGTCGATATCTGCGTCGGCACGCATGCGCTGCTCGGGAAAAGCATCCATTTCAAGGATCTCGGCCTGCTGATCGTCGATGAGGAGCAGCATTTCGGCGTCGGCCACAAGGAGCGCCTCAAGGAGTTGCGCGCCGAGGTGCATGTGCTGACGCTGTCCGCCACGCCGATCCCGCGCACGCTGCAACTGGCGCTGACGGGGGTGCGCGAACTGTCGTTGATCGCCACGCCGCCGGTCGATCGGCTGGCCGTGCGCACCTTCATCACGCCGTTCGATGCGCTCACCATCCGCGAGGCGCTGCTGCGCGAACGCTATCGCGGCGGCCAGTCGTTCTATGTCTGCCCGCGCATTGACGACCTCGCCGAGGTCAAGGCGTTCCTCGACCATGACGTGCCGGAGGTGAAGGTCGGCATCGGCCACGGCCAGATGGCGGCGGGCGAACTCGAAGACATCATGGTCAAGTTCTACGACGGCCAGTTCGACGTGCTGCTCTCGACCACCATCGTTGAAAGCGGGCTCGACATTCCGCGCGCGAACACGCTGATCGTGCATCGGGCCGACATGTTTGGCCTGTCGCAGCTCTACCAGTTGCGCGGTCGCGTCGGCCGCTCGAAGACGCGCGCCTATGCGCTGTTCACCACGCCGGTCAGCCGCAAGCTCACCGTGCAGGCCGAACGCCGGCTCAAGGTGCTGCAATCGCTCGATACGCTCGGCGCCGGCTTCCAGCTTGCCAGCCACGATCTCGACATTCGCGGCGCCGGCAACCTGCTTGGCGACGAGCAGTCCGGCCATATCAAGGAAGTCGGCTACGAACTCTATCAGCAGATGCTGGAAGAGGCGGTGGCCAACCTCAAGGCCGGCATCGAGGAGGATGAGCGTGACGCGTGGTCGCCGACCATCGCCATCGGCACGCCGGTGACCATCCCGGAAAGCTATATCGCCGATCTCGACCTGCGCATGGGCTTGTACCGGCGCCTGGCGCAACTCGAGACCGACGGCGAGATCGACGCGTTCGGTGCCGAACTGACCGATCGTTTCGGGTCGATCCCGCCCGAGGTCGAGCAGTTGCTCAAGGTCGTCACCATCAAGGCCCTGTGCCGGCGCGCCAATATCGAGAAGGTCGAGGCCGGGCCGAAGGGCATCATCGTCTCGTTCCGTGACAACGAATTCGCCAACCCGAACGGGCTGGTGCAATACGTGGCGCGCCAGGGCGTGGCCGCCAAGGTGCGCCCCGACATGCGCGTGGTGTTCATTGGCGATTTCGAGCAAACGGCGGCGCGCCTCGAGGGCACGCGCCAGTTGCTGCGCGACATTGCCGGCATCGCCGAGCGCAAGAAAGTGGCGTGA
PROTEIN sequence
Length: 1170
MTEFRKVLDAATPVTIGGVPDGAEAFVLADIAGAAFAAGADLPALAVYVARDGQRQQLIEQALDFAAPEIEVLSLPAWDCQPYDRTSPNAVVIARRMATLSRLVRSRGGERPRVVVTTVNAILQRVPPVAWIKRESLSFAPGNALDMNEIARWLDINGFQRTGTVRDAGEYAVRGGILDLFPPGMDNPIRLDFFGDTLESLRSFNPETQRTIGQLHALELLPMAEFQMTTEAIKRFRTGYTATFGAPGRDDALFEAISEGRRFPGMEHWLPLFHGGLDSLLDFTPGARIVLDPLAGQAAEERLTQIADYYDARKAALENKAAGVPYKPLPCKELYLSPAEWQAANGAAGSVHLSGFIAPEVSGRTVIHVEGRKGHSFAAERAVEGASVFEAVVAHVRAQQKAGRKVVLASWTAGSRERLAGVLADHGLTQAKPIRARREVAALAGNEVGLAVFGLESGFDLDDLTVISEQDILGERLSRPKRAQKRGKDFLTEVSSLSAGDLVVHVEHGIARFVGLKTIEAAGAPHDCLELHYAGGDRLFLPVENIELLTRYGSEDAEAALDKLGGGGWQARKARLKKRIREMARGLIKIAAARLMREAPRLDVPDGLYDEFAARFPYDETEDQQGTIDSVLDDLGSGRPMDRLVCGDVGFGKTEVALRAAFVAAMAGKQVAVVVPTTLLARQHYATFAERFKGLPLKVAQASRMVSSADLKLAKAGLADGSVDICVGTHALLGKSIHFKDLGLLIVDEEQHFGVGHKERLKELRAEVHVLTLSATPIPRTLQLALTGVRELSLIATPPVDRLAVRTFITPFDALTIREALLRERYRGGQSFYVCPRIDDLAEVKAFLDHDVPEVKVGIGHGQMAAGELEDIMVKFYDGQFDVLLSTTIVESGLDIPRANTLIVHRADMFGLSQLYQLRGRVGRSKTRAYALFTTPVSRKLTVQAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGYELYQQMLEEAVANLKAGIEEDERDAWSPTIAIGTPVTIPESYIADLDLRMGLYRRLAQLETDGEIDAFGAELTDRFGSIPPEVEQLLKVVTIKALCRRANIEKVEAGPKGIIVSFRDNEFANPNGLVQYVARQGVAAKVRPDMRVVFIGDFEQTAARLEGTRQLLRDIAGIAERKKVA*