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scnpilot_solids2_trim150_scaffold_1556_curated_5

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(8327..9793)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKB2_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 479.0
  • Bit_score: 423
  • Evalue 3.00e-115
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 479.0
  • Bit_score: 423
  • Evalue 9.30e-116
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADU44482.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 479.0
  • Bit_score: 423
  • Evalue 4.20e-115

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
GTGCTGTCACCTCAAGGCGTTCTCTTCCGCTCCCGACGGCGCTGGGCCGCGATTGCGCTCGTGCCGCTGCTCGGCGCCTGCGCGCCGGACAAGGGGGGGCTCGACCTGGCGACGCCGGCCGTGCCGGCGCAGTTCCGCGCCGGCTCCGACAAGCCCGCCGCCCCGGTCGATGCGCTGTGGGCGAAGGCGTTCGGCTCGCCCGAATTGGCGCGGCTCGTGGCGCAGGCGGCCCGCGACAACCTCGATATCGCCGCCGCCGCCGCGCGCATCGAGCAGGCCGAGGCGCAGGCGAGGATCGCCGCTGCCGGGCTGTTGCCGCAGATCAGCGGCACGGGCGACGCCTCCTATGCCCGCACGCCCGGCACGACGCGCAGTTCGCATCCACCGTTCCACGCCAGCTTGAGCCAAAGCTACGCGCTCGGGCTCAGCGCCAGCTATGCGCTCGATTTCTGGGGCAAGTACCGCGCCACCGCGCAGGCCGGCAGGCTTTTGGCCGAGGCTAGCCGCTACGATCGCGATACGGTGGTGCTCTCGACCACCGCCGCGGTCGCCAACAGCTATCTGGCGCTGCTGGCGGCGCAGGACCGGTTGGCAATCGCGCGCGAGAACATCGCCTCGGCGAGCGAAATCCTCAAGGCCGAACAGGCGCGCCTTGCCGTCGGCACCGCCACCGCGCTCGATGTCGCGCAGCAGGAAAGCCTGCTCGCCCAGCAGCGCGCCGCCGTGCCGGGCCTGACCCTGCAACTGGCGCAGAACCGCAATCTTCTCGCCGTGCTGCTCGGGCGCACGCCGGAAAGCGTCACCGTCAAGGGCGGCAGCCTGCGCCGGCTCACCGTGCCGCGCATCCGGGCAGGGCTTCCGTCGCAATTGCTGGCGCGCCGGCCCGATATCGCTGCCGCCGAGGCGGCGCTGGCCTCTTCCAGCGCCAGCGTCAAGGCGGCGCGCGCCGCCTTCCTGCCGGATTTCCAGCTCACGGCGCAGGGCGGGCTCGCCAGCATGATGCTGAAGAACCTGCTCAGGCCGGATGCCTTCGCGGCCTCGGCCGCCGCCGCCCTGACCCAGCCGATCTTCTCCGGCGGCCAGCTCGAGGGTCAGCTTGGCGCAGCCACCGGCCGCCAGAAGGAATTGCTCGAGGATTATCGCAAGGCGATCATCCAGGCGCTCGCCGATGTCGAGAACGCGCTTGAGGCGCTGCGCCAGACAGCGGCGCAGGAACGTTCGCAAGCCGTGGTCGTCGCCTCGGCCAGGCGCGCCTCCGATATCACCAAGCAGCGCCTGAAGGAGGGCACCATCGATATCGTCACGCTGCTCAACACGCAGCAGACCCTGTTCCAGGCCCAGGACCAGCTCGCCCAGGCCCGCCTCCAGCATCTCCAGGCGGCGGTGGCGCTGTATCAGGCGCTCGGCGGCGGCTGGACGCGGGCGCTGCCGCCGCTTGAGGTCGCCGGCGCGGAGGCTGCGCCATGA
PROTEIN sequence
Length: 489
VLSPQGVLFRSRRRWAAIALVPLLGACAPDKGGLDLATPAVPAQFRAGSDKPAAPVDALWAKAFGSPELARLVAQAARDNLDIAAAAARIEQAEAQARIAAAGLLPQISGTGDASYARTPGTTRSSHPPFHASLSQSYALGLSASYALDFWGKYRATAQAGRLLAEASRYDRDTVVLSTTAAVANSYLALLAAQDRLAIARENIASASEILKAEQARLAVGTATALDVAQQESLLAQQRAAVPGLTLQLAQNRNLLAVLLGRTPESVTVKGGSLRRLTVPRIRAGLPSQLLARRPDIAAAEAALASSSASVKAARAAFLPDFQLTAQGGLASMMLKNLLRPDAFAASAAAALTQPIFSGGQLEGQLGAATGRQKELLEDYRKAIIQALADVENALEALRQTAAQERSQAVVVASARRASDITKQRLKEGTIDIVTLLNTQQTLFQAQDQLAQARLQHLQAAVALYQALGGGWTRALPPLEVAGAEAAP*