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scnpilot_solids2_trim150_scaffold_1072_curated_10

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(11144..11821)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Methylopila sp. M107 RepID=UPI00037D5CB1 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 215.0
  • Bit_score: 389
  • Evalue 2.20e-105
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 225.0
  • Bit_score: 378
  • Evalue 1.20e-102
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD87389.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 225.0
  • Bit_score: 378
  • Evalue 5.40e-102

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGAGATTGCTCGTCGTCGAGGATGATCGCGACCTGAACCGCCAGATTTCCACCGCCCTGTCCAATGCCGGCTATGCCGTCGATCATGCATTCGACGGCGAGGAAGGGCATTTCCTCGGCGATACGGAACCTTACGACGCCGTGATCCTCGATGTCGGGCTGCCGAAGCTCGACGGCATCGCCGTGCTGGAGCGATGGCGCCGCGACGGCCGTGTCATGCCGGTGCTGATCCTGACGGCGCGCGACCGCTGGAGCGACAAGGTCGAGGGTTTCGATGCCGGCGCCGACGATTACGTGCCCAAGCCCTTCCATATGGAAGAAATCCTCGCCCGCGTCCGCGCCCTGCTGCGCCGCGCCACCGGCCACGCCACCAGCGAGCTGACCTACGGCCCGGTGACGCTCGATACGCGCTCGAGCCGGGTCGTCGTCGATGGCGCGGCGGTCAAGCTCACCTCGCATGAATATCGCCTGCTCTCCTACCTGATGCACCATCAGGGCAGGGTGGTGTCGCGCAGCGAACTGGTCGAGCATCTTTACGATCAGGATTTCGATCGCGATTCGAACACGATCGAGGTTTTCGTCGGCCGGCTGCGCCGCAAGCTCGGCGTCGATGTCATCCAGACGGTGCGCGGCCTCGGCTATCTTTGCGAGCCGCCCGGCGGCGCTCCGGCGGCCTAG
PROTEIN sequence
Length: 226
MRLLVVEDDRDLNRQISTALSNAGYAVDHAFDGEEGHFLGDTEPYDAVILDVGLPKLDGIAVLERWRRDGRVMPVLILTARDRWSDKVEGFDAGADDYVPKPFHMEEILARVRALLRRATGHATSELTYGPVTLDTRSSRVVVDGAAVKLTSHEYRLLSYLMHHQGRVVSRSELVEHLYDQDFDRDSNTIEVFVGRLRRKLGVDVIQTVRGLGYLCEPPGGAPAA*