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scnpilot_solids2_trim150_scaffold_3226_curated_4

Organism: solids_Rhizobiales_2

partial RP 19 / 55 MC: 1 BSCG 19 / 51 ASCG 9 / 38 MC: 1
Location: comp(2001..2546)

Top 3 Functional Annotations

Value Algorithm Source
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 171.0
  • Bit_score: 240
  • Evalue 4.20e-61
Peptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; Short=PDF {ECO:0000255|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000255|HAMAP-Rule:MF_00163};; Polypeptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 171.0
  • Bit_score: 240
  • Evalue 1.90e-60
Peptide deformylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=DEF_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 171.0
  • Bit_score: 240
  • Evalue 1.30e-60

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGACCATCCGCCCTCTCGTCATCCTGCCCGACAACCAGCTTCGGCTTCGCTCGAAGCCCGTGGAAACCTTCGATCGCGCGCTCGAAAAACTCGTCGAGGACATGTTCGAGACGATGTATGACGCGCCGGGCATCGGGCTTGCCGCGATCCAGATCGGCGTGCCGCTGCGCGTCGTCACCATGGATCTCGCGCCCAAGGACGAGCCGCGCGAGCCGCGCATCTTCGTCAATCCCGAGATCGTGTCGCGCTCGGAAGCCTTCGCGTGCTACGAGGAGGGCTGCCTGTCGATCCCGGATTATTATGAGGATGTCGAGCGGCCGGACCGCGTGCGCGTCGCCTATCAGGATATGAAGGGCGCGCGCCACGAACTCGATGCCGACGGGTTGATGGCGACCTGCATCCAGCACGAGATCGACCATCTGAACGGCGTGCTGTTCATCGATCATATCTCCAAGCTGAAGCGTGACCGCGTGGTGAAGAAATTCGTCAAGCAGGCCAGGCGCGACGGGCCGGCGGGCGCCAAGCCGCAGCACGAGGCGTTGTAA
PROTEIN sequence
Length: 182
MTIRPLVILPDNQLRLRSKPVETFDRALEKLVEDMFETMYDAPGIGLAAIQIGVPLRVVTMDLAPKDEPREPRIFVNPEIVSRSEAFACYEEGCLSIPDYYEDVERPDRVRVAYQDMKGARHELDADGLMATCIQHEIDHLNGVLFIDHISKLKRDRVVKKFVKQARRDGPAGAKPQHEAL*