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scnpilot_solids2_trim150_scaffold_5248_curated_4

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 2538..2843

Top 3 Functional Annotations

Value Algorithm Source
Factor for inversion stimulation Fis, transcriptional activator n=2 Tax=Rhodanobacter denitrificans RepID=M4NCL9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 105.0
  • Bit_score: 156
  • Evalue 1.80e-35
Factor for inversion stimulation Fis, transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 105.0
  • Bit_score: 156
  • Evalue 5.80e-36
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 106.0
  • Bit_score: 159
  • Evalue 2.30e-36

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
GTGAATGCCGCCAGACTGCCTGCCGCCGAGGCTGCCGTATCGACCTCGTCGCAAGCTGCGCTTGCGCACGGCTCCGGCAGCGCACTGAGTGAGTGCGTCAGCCGCACGGTGCGACGCTATCTGGCCGACATCGGCGACACCGAATGTGCCGAGGGCCTGCACGCGCTGGTGCTGCACGAAGTCGAAGTGCCGCTGCTGCGCGAGGTGCTGGCCTTCCACGGCGGCAACCAGAGCCGCGCCGCCGTGGCGCTGGGCATCAATCGCGCCACGCTGCGCAAGAAGCTGGCGGCGCACGGGTTGCTTTGA
PROTEIN sequence
Length: 102
VNAARLPAAEAAVSTSSQAALAHGSGSALSECVSRTVRRYLADIGDTECAEGLHALVLHEVEVPLLREVLAFHGGNQSRAAVALGINRATLRKKLAAHGLL*