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scnpilot_solids2_trim150_scaffold_438_curated_5

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(3787..5262)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMQ2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 491.0
  • Bit_score: 844
  • Evalue 7.10e-242
Type II secretion system protein E {ECO:0000313|EMBL:EIL88493.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 491.0
  • Bit_score: 844
  • Evalue 9.90e-242
type II secretion system protein E; K02454 general secretion pathway protein E similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 484.0
  • Bit_score: 717
  • Evalue 4.10e-204

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGCTGACGAAGCCGCCCGTGCCGTATGCCTTCGCCAAGGCCAACGGCATCGCCGTCACCGGACTTGGCGACGGTGTCGCCGAAGTCGTCGTGCGCCATGGCGCGTCGGCTGGCGCGCTGGCCGAGCTGCGACGCGCACTCGGCGTGCCCATTCGTGCGCAGCGCGTCGGCACAGGCGAGTTCGACGAGCGTATCGCCACCTTGTACAACGGCGCCGACGAAGGCGCGGCTGCGCTGGCGGACGACCTCGCACAAGACATGGATCTGTCCCGGTTGCTGCAGGAAATACCGCGCGTCGAGGACCTGCTGGACAGCCAGAACGACGCGCCGCTGATCCGCCTGATCAACGCCTTGCTGACCCAGGCGTTGCGCGAAGGCGCTTCGGACATCCACATCGAACCGTTCGAGTCGCGCTCGGTGGTTCGGCTGCGCATCGACGGTACGTTGCGCGATCTGATCGAGCCCGCACGCGCGCTGCATACGGCCATCGTGTCGCGCGTGAAGATCATGGCGCAGCTCGATATCGCCGAGAAACGCCTGCCGCAGGACGGCCGCATCGCGCTGCGCGCCGCCGGCAAGCCGATCGACGTGCGGGTGTCGACGATCCCGACCGGCCACGGCGAGCGTGTCGTGCTGCGCCTGCTGGACAAGCAGGCCGGCCGGCTCGAACTGTCCCGGCTGGGCATGGACCCGCCCACCCTCGCGCAAGTGGACGCGCTGATCCGCGAGCCGCACGGCATCATCCTGGTGACCGGTCCCACGGGTTCCGGCAAGACCACCACGCTGTATGCCGCGCTGTCGCGGCTGGATCCCAAGGCGCTCAACATCATGACCGTCGAGGATCCGATCGAGTACGACCTCGACGGCATCAACCAGACGCAGACCAACAGCCGCGTCGACATGAGCTTCGCGCGTGCCCTGCGCACCATCCTTCGCCAGGACCCGGACGTGATCATGATCGGCGAAATCCGCGACCTGGAGAGCGCGCAGATCGCGATACAGGCCAGCCTCACCGGGCATCTGGTGCTCACCACGCTGCATACGAACGACGCGGTGAGCGCCGTCACCAGGCTGGTCGACATGGGCGTCGAGCCCTTTCTGCTTGCGTCCAGCCTGATCGGCATCGGCGCCCAGCGCCTGGTGCGCAAGCTCTGCCGGGAATGTCGTGCGCCGCTGGCAGCCGATGCCGTGCAGTTGCGCAGCCTCGGTCTGGCGTCTGCACCGGGCAATTTCCATGCGGCGGTCGGTTGCCCTGCGTGCAACCGCTCCGGCTACAAGGGCCGTACCGGCATCTACGAATGGCTCACGGTCGATGACGAGCTCCGCAAGCTCATCCACGACCGGGTGGACGAGCAGACGCTGCGCGAACACGCCGGCGCGCATGGCATGGGTTCGCTGCGCGACGACGGCATGCGACTGGCCGCCGAAGGCACGGTGAGCCTGGAGGAAGTGCTGCGCGTCACCCGCGAGCGGTAG
PROTEIN sequence
Length: 492
MLTKPPVPYAFAKANGIAVTGLGDGVAEVVVRHGASAGALAELRRALGVPIRAQRVGTGEFDERIATLYNGADEGAAALADDLAQDMDLSRLLQEIPRVEDLLDSQNDAPLIRLINALLTQALREGASDIHIEPFESRSVVRLRIDGTLRDLIEPARALHTAIVSRVKIMAQLDIAEKRLPQDGRIALRAAGKPIDVRVSTIPTGHGERVVLRLLDKQAGRLELSRLGMDPPTLAQVDALIREPHGIILVTGPTGSGKTTTLYAALSRLDPKALNIMTVEDPIEYDLDGINQTQTNSRVDMSFARALRTILRQDPDVIMIGEIRDLESAQIAIQASLTGHLVLTTLHTNDAVSAVTRLVDMGVEPFLLASSLIGIGAQRLVRKLCRECRAPLAADAVQLRSLGLASAPGNFHAAVGCPACNRSGYKGRTGIYEWLTVDDELRKLIHDRVDEQTLREHAGAHGMGSLRDDGMRLAAEGTVSLEEVLRVTRER*