ggKbase home page

scnpilot_solids2_trim150_scaffold_7282_curated_2

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: 1152..3440

Top 3 Functional Annotations

Value Algorithm Source
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WMU3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 763.0
  • Bit_score: 1394
  • Evalue 0.0
Acriflavin resistance protein {ECO:0000313|EMBL:EIL98146.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 763.0
  • Bit_score: 1393
  • Evalue 0.0
cation/multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 763.0
  • Bit_score: 1384
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2289
ATGAATCTTTCCGGCACCTTCATCCGCCGTCCGATCGGCACCTCGCTGCTGGCGATCGGCCTGTTCGTGGGCGGCATGATCTGCTACTTCCTGCTCGGCGTGGCCGCGCTGCCGAACATGCAGTTCCCGGCGATCTTCGTGCAGGCCAGCCAGGCCGGCGCGGACGCCAGCACGATGGCGTCGACCGTGGCCGCGCCGCTGGAACGCCACCTGGGCCAGGTGCCCGGCATCGAGACGATGCGTTCGTCCAGCTCCGAGGGCCGCACCTTCGTCTTCATGATGTTCCGCACCGGCACCGACCTGGACGCTGCCGCGCGCGACGTGCAGGCGGCGATCAACGCGGCGGCGCCGGACCTGCCCAGCGGCCTCAACGGCGCGCCCAGCTACCAGAAGGCGAACCCCAACGACGACCCGATCATCGCGCTGGCGCTGACCTCGGACACGCAGTCGGCGGCCGACCTGTACAACCTGTCCGACACCCTGCTGGCGCAGCGGCTGCGCCAGCTGCCGGGCGTGTCGTCGGTGGAGATCGCCGGCGCGGCCACGCCGGCGATCCGCGTCGACGTGAACCTGCGCGCGCTGAACGCGATCGGGCTGTCGCCCGACCAGCTGCGCAACGCGCTGAGCGCGGCCAACGTGACCTCGCCGGAAGGCTTCCTGTCCAACGGCAGGACCGCCATGGCGATCAGCGCCACCACCCAGCTGCACAGCGCCGAGGACTTCGCCCGGCTGGTGGTCGCCAGCCGCAACGGCACGCCGGTACGTTTGTCCGACGTGGCCAAGGTCTACGCCGGCCAGCAGGACGCGTACCAGGCGGCCTGGTTCCACGGCAAGCCGGCCGTGCTGATGTACGTCTACAAGAAGGCCGACGCCAACATCATCGCCACCGTCGACCTGGTCAAGCAGCAACTGCCGGCGCTGCGCGGCTACCTGCCGCCGGCCACCGCGCTGACTCCGTTCTTCGACGGCACGCCGACCATCCGCGCCTCGCTGCACGAGGTGCAGGCCACGCTGCTGATCTCGCTGGCGATGGTGATCCTGGTGATGGCGCTGTTCCTGCGCCGGCTGGCGCCCACGCTGATCGCCGCGGTGGCGGTGCCGCTGTCGCTGGCCGGCGCGTTCGTGATGATGTACGTGCTCGACTACACGCTCAACAACCTCACCCTGCTGGCGCTGGTGATCGCGATCGGCTTCGTCGTGGACGACGCGATCGTGGTGATCGAGAACGTCATCCGCCACCTCGACGCGGGCATGTCGCGGATGCAGGCGACCCTGGCCGGCGCACGCGAGATCGGCTTCACCATCGTCTCGATCACCGCCTCGCTGGTCGCCGTGTTCATCCCGCTGCTGTTTGCCGGCGGCGTCACCGGCATGTTCATGCACGAGTTCGCGATGACCCTGGTGGCGGCGATCGTGGTCTCCGCGCTGGTCTCGCTGACCTTGACCCCGGCGCTGTGCGGGCGCTTCCTCGGCGGCCATGCGGCGAAGGAGCAGGCGCCGCCGTCGCGGCTCGCCCGCATGCTGGACGGCTTCCACGTCGGCATGCTGCGCGTCTACACCCGCGCGCTGAACTTCTCGCTGCGCCACGCGCTGGCGTTCTCGCTGACCCCGTTGGCGCTGATCGTGGCCACGTTCTACCTGTTCGGCGTGGTCAAGGCCGGCCTGTTCCCGGCGCAGGACACCGGCCTGATCTGGGGCCGTGCCAGTTCCAGCGCCACCGTGTCGTTCGCCGAAAGCCGGCAGCGGCTGGAGCGGCTCACCGCGATGCTGATGGCCGACCCCGACGTCGCCACCGTGGGCTCGCGCCTGGGCAGCAGCCGGCAGGGCACCAGCGGCTCGTTCAACATCGACCTGAAGACCCGCGCCGAAGGCCGCACCGACGACACCTTCGCGGTGCTCGCGCGGCTCAGCGCGAAGGCGGCCAACTACCCCGACCTCAACCTGCGCCTGCGCCCGGTGCAGGACCTGCCCAGCGGCGGTGGCGGCGGCACCAGCCAGGGCGCGCAATACCAGGTGTCGCTGCAGGGCAACGACCTGGCCAGCCTGCAGGAGTGGCTGCCGAAACTGCAGGCCGAGCTGAAGAAGAACCCGAAGCTGCGCGACGTCGGCACCGATGTCGACGAGGCCGGCCTGCGCCAGAACATCGTGATCGACCGCGACAAGGCCGCGCGCCTGGGCGTGTCGATCGGCGCCATCGACGGCGCGCTGTACGACGCGTTCGGCCAGCGCCAGGTGTCCACCATCTACTCGGACACCAACCAGTACCAGGTGGTGGTCAACGCGCTGCCC
PROTEIN sequence
Length: 763
MNLSGTFIRRPIGTSLLAIGLFVGGMICYFLLGVAALPNMQFPAIFVQASQAGADASTMASTVAAPLERHLGQVPGIETMRSSSSEGRTFVFMMFRTGTDLDAAARDVQAAINAAAPDLPSGLNGAPSYQKANPNDDPIIALALTSDTQSAADLYNLSDTLLAQRLRQLPGVSSVEIAGAATPAIRVDVNLRALNAIGLSPDQLRNALSAANVTSPEGFLSNGRTAMAISATTQLHSAEDFARLVVASRNGTPVRLSDVAKVYAGQQDAYQAAWFHGKPAVLMYVYKKADANIIATVDLVKQQLPALRGYLPPATALTPFFDGTPTIRASLHEVQATLLISLAMVILVMALFLRRLAPTLIAAVAVPLSLAGAFVMMYVLDYTLNNLTLLALVIAIGFVVDDAIVVIENVIRHLDAGMSRMQATLAGAREIGFTIVSITASLVAVFIPLLFAGGVTGMFMHEFAMTLVAAIVVSALVSLTLTPALCGRFLGGHAAKEQAPPSRLARMLDGFHVGMLRVYTRALNFSLRHALAFSLTPLALIVATFYLFGVVKAGLFPAQDTGLIWGRASSSATVSFAESRQRLERLTAMLMADPDVATVGSRLGSSRQGTSGSFNIDLKTRAEGRTDDTFAVLARLSAKAANYPDLNLRLRPVQDLPSGGGGGTSQGAQYQVSLQGNDLASLQEWLPKLQAELKKNPKLRDVGTDVDEAGLRQNIVIDRDKAARLGVSIGAIDGALYDAFGQRQVSTIYSDTNQYQVVVNALP