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scnpilot_solids2_trim150_scaffold_33917_curated_2

Organism: solids_Rhodanobacter_1

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 4 ASCG 8 / 38 MC: 1
Location: comp(274..1698)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBZ8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 474.0
  • Bit_score: 701
  • Evalue 7.20e-199
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:EIL96989.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 474.0
  • Bit_score: 701
  • Evalue 1.00e-198
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 471.0
  • Bit_score: 700
  • Evalue 2.90e-199

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
CGCCACGGCTTCGACACGCCGGTGGAGGATTCCTCCGCGCCGATCCACGACCACGCCGGCAACGTGGTCGGCGGCGTGCTGGTGTTCCACGATGTCAGCGAAACGCGCGCCTTCGCGCTCAAGCTGGTGCACCTGACCCAGCACGACACGCTCACCGGCCTGCCGAACCGCAGCCAGTTGCAGGACCACCTGACCCAGGCGCTGGCCAATGCGCGGCGCCGGCAGCAGCGCGTGGCGCTGCTGTACATCGACATCCACCAGTTCAAGCAGATCAACGACCAGCACGGACAGGCTGCCGGCGACAGCGTGCTGCGCGCGTTCGTGGCGCAGCTGCAGCGCCGCCTGCCTGCCGAGGCGCAGCTGCTGCGCTATGGCGGCGACGAGTTCGTGGTGGTGCTCTCCGCGCTGGACAGCACCAGCGAAGCGGCCAGCCTGGCGCGCGCCCTGATCGACCAGGGCGAGCAGACCCGGGTGGACGGCCTGCATGCGCTGGGCCTGCATCTGGGCATCGGCATCAGCGTCTATCCCGACGATGCGCTGGACCCGGAAACCCTGCTGCAGCATGCCGAGACCGCGCTGGTCGCGCTGCGCAGCCAGGGCGTGCACGGCTGCCGCTTCTTCACCGCCTCGATGGATGAGCGCGCGCGCGCCCGCCGCAGCATCGAGTCGGCGCTGCGCCAGGCCTTGCCGCGCGGCCAGCTGAGCCTGCACTACCAGCCGCGCATCGCGGCCTCCAGCGGACAGATCGTGGGTGCCGAGGCCCTGCTGCGCTGGCATGTGCGCGGACGCGAGCTGTACAAGCCCGACCAGTTCATCCCGGTCGCCGAGGACACCGGCCTGATCCTGCCGATCGGCACCTGGGTGCTGCGCCAGGCGTGCCGGCAGGCGCGCGCATGGCAGCAGCAGGGGTACCGCATCCCGGTCTCGGTCAACGTCTCGCCGGTGCAGTTCCAGCACGCCGATTTCCCCGACTGGCTGGCCGAGGCGCTGGCCGAGAGTGGGCTCGATCCCGGCCTGCTCGAGCTGGAGCTGACCGAGCGCATGGTGATGTCCGGCGGCGACGTCACCGGCAACCTGCTGCAGCGGATCCGCCAGCGCGGCGTGCGCCTGTCGCTGGACGACTTCGGCACCGGCTACTGCAGCCTGTCCTACCTCAAGCATTTCCCGATCGACACCTTGAAGATCGACCGCGTGTTCGTGCACGACGTGATCGGCGACGCCGACACCGCCACCATCACCAGCGCGATCATCGCCATGGCGCAGCGGCTGGACAAGCTGGTGGTCGCCGAAGGGGTGGAGACCGAAGCGCAGGCCGCGTTCCTGCGCCAGGCCGGCTGCGCCGAACTGCAGGGCTTCCTGTTCGCCGCGGCACTGCCGGTCGCCGACTTCGAAAAGCTACTGACCGAACCCGCCCGCGCGACGTAG
PROTEIN sequence
Length: 475
RHGFDTPVEDSSAPIHDHAGNVVGGVLVFHDVSETRAFALKLVHLTQHDTLTGLPNRSQLQDHLTQALANARRRQQRVALLYIDIHQFKQINDQHGQAAGDSVLRAFVAQLQRRLPAEAQLLRYGGDEFVVVLSALDSTSEAASLARALIDQGEQTRVDGLHALGLHLGIGISVYPDDALDPETLLQHAETALVALRSQGVHGCRFFTASMDERARARRSIESALRQALPRGQLSLHYQPRIAASSGQIVGAEALLRWHVRGRELYKPDQFIPVAEDTGLILPIGTWVLRQACRQARAWQQQGYRIPVSVNVSPVQFQHADFPDWLAEALAESGLDPGLLELELTERMVMSGGDVTGNLLQRIRQRGVRLSLDDFGTGYCSLSYLKHFPIDTLKIDRVFVHDVIGDADTATITSAIIAMAQRLDKLVVAEGVETEAQAAFLRQAGCAELQGFLFAAALPVADFEKLLTEPARAT*